Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227887

Identifier: 21227887

GI number: 21227887

Start: 2132766

End: 2133959

Strand: Direct

Name: 21227887

Synonym: MM_1785

Alternate gene names: NA

Gene position: 2132766-2133959 (Clockwise)

Preceding gene: 21227886

Following gene: 21227888

Centisome position: 52.07

GC content: 48.66

Gene sequence:

>1194_bases
TTGCTGTGGGAACCCCAGGGAAAACCTCTTGATGTAACTACAACGCAAAACGAGGCCCTGCTTGAATTGACAGGCAGTAC
TGCCAGGCTTTCCGGTGAAAACCATATTGAGACAGCTACTGCTTATTCCCAGGCAATCTATGCCGCTGCCCAGGACAAAG
ATAGACCTGGTGCTGTTGTCCTTGTAAGGGACGATGACCCTGCAATCGCACTTGCAACTACACGCCTGCAGCATATGCCT
GTTAACGCGCCCATGCTTTTTATTACTGATAACGGTACCTTGCTGCCGGAAGAGACCAGAAAAGAGCTGGAAAGGCTTGG
GCCGGAAGGGGTCATGATGGATAATAATGTGCAGGTATACCTTGTAGGAAATATTGATCAGAGCGTGGTTGATGAGGTTG
AAAAACTCAGACTCAAAACACGTGCGATATACGCTTCAAACCCGGTTCAGCTTGCCGAAGTCCTGGATGAATATATTGCA
GTCCTGGAGTCTGACCACAGGCAGATTATATTTATAGCTTACACGGATGCACTTGAGTATGCATATCCTGCAGCTAACTG
GAATGCTCATATGGGAGATGGTTTTGCTTATGTAACTCCAGACGGGGTGCCCGAAGAAACCAGGAGAATTCTTGAAAGGC
GGTGGCCGTATTATCCTTACATATACGTCTTCGCTCCCTCTTCAGTTGTCGATAACGAGACAATGGCAGAACTTTCTCAA
TACGGGCATGTCCAGCGCATTCCGGGAGATACTCCTCAGGAAATGGCAGTAAGGTGGGCCGGATACAAAGACAGCGGACA
CATGACTTCATGGCTTGTAGGATACAAAGCACGCAGTGTTGGCTGGGGTTATGCAGAGCCCGGTCATAATATGCTTCTGG
CAAACCCGGGAGACTGGCGGACTGTGGTCCCGAGCGGAGTGCTGTCCCATATGGGAAAACACGGGTTCCTTATCCTGACA
GAACCAGGTGGGGAGCTTCCGGATGATACACGCTCTTATCTGCAGGTTATAAAACCCGAGCCAGTATATCCCAGCCAGCA
GGTATTCAATTTTGCCTGGATTCTTGGGGACGTAAGCGAAGAAACTGTCCAAGAGCTAGATCAGCTACTCAGGGTATCTT
CTCCTTTTGAAGAGAACAATAGCAGTTCGATAGCGAGGATTACTCTAAGTTTAACAAATACATCCCGCGATTAA

Upstream 100 bases:

>100_bases
TGGTTAAAGCCGGATGGAAGGAGGGAGAGATGTGATAAAGCCTCTGTATACTCTTCTTGCAGTTGCTGTCCTTACGGTTA
TTTTGATCTCGGGTTATGTA

Downstream 100 bases:

>100_bases
CATATTTTTTTGGGTAATCTTCTTGGTCATGGAACTGAGAATGTTAACCTTGATAAAAGTGTGGAATCTAAAGTTATGTT
AGTTTTTGTTATGTTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Transcriptional Regulator; Cell-Surface Protein; ArsR Type Transcriptional Regulator

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MLWEPQGKPLDVTTTQNEALLELTGSTARLSGENHIETATAYSQAIYAAAQDKDRPGAVVLVRDDDPAIALATTRLQHMP
VNAPMLFITDNGTLLPEETRKELERLGPEGVMMDNNVQVYLVGNIDQSVVDEVEKLRLKTRAIYASNPVQLAEVLDEYIA
VLESDHRQIIFIAYTDALEYAYPAANWNAHMGDGFAYVTPDGVPEETRRILERRWPYYPYIYVFAPSSVVDNETMAELSQ
YGHVQRIPGDTPQEMAVRWAGYKDSGHMTSWLVGYKARSVGWGYAEPGHNMLLANPGDWRTVVPSGVLSHMGKHGFLILT
EPGGELPDDTRSYLQVIKPEPVYPSQQVFNFAWILGDVSEETVQELDQLLRVSSPFEENNSSSIARITLSLTNTSRD

Sequences:

>Translated_397_residues
MLWEPQGKPLDVTTTQNEALLELTGSTARLSGENHIETATAYSQAIYAAAQDKDRPGAVVLVRDDDPAIALATTRLQHMP
VNAPMLFITDNGTLLPEETRKELERLGPEGVMMDNNVQVYLVGNIDQSVVDEVEKLRLKTRAIYASNPVQLAEVLDEYIA
VLESDHRQIIFIAYTDALEYAYPAANWNAHMGDGFAYVTPDGVPEETRRILERRWPYYPYIYVFAPSSVVDNETMAELSQ
YGHVQRIPGDTPQEMAVRWAGYKDSGHMTSWLVGYKARSVGWGYAEPGHNMLLANPGDWRTVVPSGVLSHMGKHGFLILT
EPGGELPDDTRSYLQVIKPEPVYPSQQVFNFAWILGDVSEETVQELDQLLRVSSPFEENNSSSIARITLSLTNTSRD
>Mature_397_residues
MLWEPQGKPLDVTTTQNEALLELTGSTARLSGENHIETATAYSQAIYAAAQDKDRPGAVVLVRDDDPAIALATTRLQHMP
VNAPMLFITDNGTLLPEETRKELERLGPEGVMMDNNVQVYLVGNIDQSVVDEVEKLRLKTRAIYASNPVQLAEVLDEYIA
VLESDHRQIIFIAYTDALEYAYPAANWNAHMGDGFAYVTPDGVPEETRRILERRWPYYPYIYVFAPSSVVDNETMAELSQ
YGHVQRIPGDTPQEMAVRWAGYKDSGHMTSWLVGYKARSVGWGYAEPGHNMLLANPGDWRTVVPSGVLSHMGKHGFLILT
EPGGELPDDTRSYLQVIKPEPVYPSQQVFNFAWILGDVSEETVQELDQLLRVSSPFEENNSSSIARITLSLTNTSRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44347; Mature: 44347

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWEPQGKPLDVTTTQNEALLELTGSTARLSGENHIETATAYSQAIYAAAQDKDRPGAVV
CCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
LVRDDDPAIALATTRLQHMPVNAPMLFITDNGTLLPEETRKELERLGPEGVMMDNNVQVY
EEECCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCEEEE
LVGNIDQSVVDEVEKLRLKTRAIYASNPVQLAEVLDEYIAVLESDHRQIIFIAYTDALEY
EEECCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHH
AYPAANWNAHMGDGFAYVTPDGVPEETRRILERRWPYYPYIYVFAPSSVVDNETMAELSQ
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHCCCHHHHHHHH
YGHVQRIPGDTPQEMAVRWAGYKDSGHMTSWLVGYKARSVGWGYAEPGHNMLLANPGDWR
CCCEEECCCCCHHHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCE
TVVPSGVLSHMGKHGFLILTEPGGELPDDTRSYLQVIKPEPVYPSQQVFNFAWILGDVSE
EECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHEECCCCCCCHHHHHEEEEEECCCCH
ETVQELDQLLRVSSPFEENNSSSIARITLSLTNTSRD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MLWEPQGKPLDVTTTQNEALLELTGSTARLSGENHIETATAYSQAIYAAAQDKDRPGAVV
CCCCCCCCEEEEEECCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
LVRDDDPAIALATTRLQHMPVNAPMLFITDNGTLLPEETRKELERLGPEGVMMDNNVQVY
EEECCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEECCCEEEE
LVGNIDQSVVDEVEKLRLKTRAIYASNPVQLAEVLDEYIAVLESDHRQIIFIAYTDALEY
EEECCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHH
AYPAANWNAHMGDGFAYVTPDGVPEETRRILERRWPYYPYIYVFAPSSVVDNETMAELSQ
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCHHCCCHHHHHHHH
YGHVQRIPGDTPQEMAVRWAGYKDSGHMTSWLVGYKARSVGWGYAEPGHNMLLANPGDWR
CCCEEECCCCCHHHHHEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCE
TVVPSGVLSHMGKHGFLILTEPGGELPDDTRSYLQVIKPEPVYPSQQVFNFAWILGDVSE
EECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHEECCCCCCCHHHHHEEEEEECCCCH
ETVQELDQLLRVSSPFEENNSSSIARITLSLTNTSRD
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA