| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227884
Identifier: 21227884
GI number: 21227884
Start: 2128309
End: 2129733
Strand: Direct
Name: 21227884
Synonym: MM_1782
Alternate gene names: NA
Gene position: 2128309-2129733 (Clockwise)
Preceding gene: 21227883
Following gene: 21227886
Centisome position: 51.96
GC content: 46.04
Gene sequence:
>1425_bases ATGTCACCCTCCATGGTAGGAATGAGTTTTCTGGTTCTGGGAATAATTCTGCTACTTGGAAAGTGGATACGGGTAATAAC TCCCAATCTTCAGAAACTCTTTATCCCCAGCTCTTTAATCGGCGGATTTCTGGCCCTCATTCTCGGACCACAGGTCCTGG GTAACCTGGTTGAAGGGCTGGAATATGAAAACACTGCATTTTCCATTCTTGCCGGCGGAATATTTCCTGAAGATATGCTC GCTATATGGGCTTCCCTTCCGGGACTCTTCATAAATATCATTTTTGCCACCCTTTTTCTGGGAAAAAAACTTCCCGGAAT TAGGGAGATCTGGAACATAGCAGGTCCCCAGGTCTCATTTGGCCAGACGGTAGCCTGGGGGCAGTATGTTTTCGGAATAC TGGTAACTTTCCTTATACTCACTCCCTACTTCGGGATTAATCCTATAGCAGGTGCACTGATAGAGATAGGATTTGAAGGA GGCCACGGGACTGCAGCAGGTATGGCTTCTACTTTTGCAGAGGCCGGATTCCCTGAAGGTGCAGACCTGTCAATCGGCCT GGCTACTGTAGGCTTACTCTTCAGTGTGATCCTTGGAATTTTGCTCTTAAACTACGGTGTAAGGACTGGAAAATCTTCCA TTCTGAAAGTGCCGGATGAAATCTCCCTTAAAAAAAGTGAACAGGCAGGGGTTGTTGATTTCGATGCACGGGAATGCGCA GGCAAAATAACAACAAGGCCCGAATCCATAGAACCCCTATCAATGCATTTTGCTTATGTAGGAGTTGCTATAGGAATAGG TTACATTATCCTTCAAATCCTCCAGTTGATAGAGGAGCTGGCCTGGGGCAGGACAACAGGCATCCACCTTCTGGAACACA TGCCCCTTTTTCCACTTGCAATGATTGGCGGGATTATTCTTGAGATGTTTCTTGACAGGTTTGATACATACAAAACGCTT GATAGAAACCTGATGATGAGGATACAGGGGCTTTCTCTGGATATTTTGATAGTTAGTGCCATCGCCACTCTTTCTCTTGA AGCAATAGGCGGAAATCTGGCACCTTTTCTTATCCTGAGCATCGTGGGGATTTTCTGGAATGTAGCAGCCTTTCTTTTGC TCGCACCCAGAATGATCCCTTCATACTGGTTTGAAAGGGGCATGGGAGATTTCGGGCAGTCTATGGGCATGACTGCAAGC GGGCTTTTGCTGATGAAAATAGCAGACCCTGAAAACAGGTCTCCTGCTCTTGAAAGCTTTGGATACAAACAGCTCATGTT TGAACCAGTTGTTGGAGGGGGACTTTTCACAGCCACTTCCGTTCCTTTAATCTTCAATTTCGGCCCTGTTCCCGTTCTTA TATTTACAGCTGTCGTGATGCTTTTCTGGAGCGGATTAGGGCTTTTATATTTTGGCCGGAAATGA
Upstream 100 bases:
>100_bases ATTTAAAAAGGAACTGAATACGGTCAACTAAGTAACATCCTCCCTATTAATCGAGTATCATTTTATAATATATTCTAATA ACGAATACGGAGTAATCACG
Downstream 100 bases:
>100_bases CGGGGTTATTCTGTTGGTTTTTATACTTTATCCGGCCTAATTAGCTCTCTTTTTCATTCAGTAATAACGCCATTTATTTT TCTTTTTTAAAACTCTCCTA
Product: Sodium/glutamate symport carrier protein
Products: NA
Alternate protein names: Na+/Glutamate Symporter; Sodium/Solute Symporter Family Protein; SodiumSolute Symporter ESS Family; Sodium/Glutamate Symport Carrier Protein; Sodium/Glutamate Symporter Superfamily; Integral Membrane Protein
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSPSMVGMSFLVLGIILLLGKWIRVITPNLQKLFIPSSLIGGFLALILGPQVLGNLVEGLEYENTAFSILAGGIFPEDML AIWASLPGLFINIIFATLFLGKKLPGIREIWNIAGPQVSFGQTVAWGQYVFGILVTFLILTPYFGINPIAGALIEIGFEG GHGTAAGMASTFAEAGFPEGADLSIGLATVGLLFSVILGILLLNYGVRTGKSSILKVPDEISLKKSEQAGVVDFDARECA GKITTRPESIEPLSMHFAYVGVAIGIGYIILQILQLIEELAWGRTTGIHLLEHMPLFPLAMIGGIILEMFLDRFDTYKTL DRNLMMRIQGLSLDILIVSAIATLSLEAIGGNLAPFLILSIVGIFWNVAAFLLLAPRMIPSYWFERGMGDFGQSMGMTAS GLLLMKIADPENRSPALESFGYKQLMFEPVVGGGLFTATSVPLIFNFGPVPVLIFTAVVMLFWSGLGLLYFGRK
Sequences:
>Translated_474_residues MSPSMVGMSFLVLGIILLLGKWIRVITPNLQKLFIPSSLIGGFLALILGPQVLGNLVEGLEYENTAFSILAGGIFPEDML AIWASLPGLFINIIFATLFLGKKLPGIREIWNIAGPQVSFGQTVAWGQYVFGILVTFLILTPYFGINPIAGALIEIGFEG GHGTAAGMASTFAEAGFPEGADLSIGLATVGLLFSVILGILLLNYGVRTGKSSILKVPDEISLKKSEQAGVVDFDARECA GKITTRPESIEPLSMHFAYVGVAIGIGYIILQILQLIEELAWGRTTGIHLLEHMPLFPLAMIGGIILEMFLDRFDTYKTL DRNLMMRIQGLSLDILIVSAIATLSLEAIGGNLAPFLILSIVGIFWNVAAFLLLAPRMIPSYWFERGMGDFGQSMGMTAS GLLLMKIADPENRSPALESFGYKQLMFEPVVGGGLFTATSVPLIFNFGPVPVLIFTAVVMLFWSGLGLLYFGRK >Mature_473_residues SPSMVGMSFLVLGIILLLGKWIRVITPNLQKLFIPSSLIGGFLALILGPQVLGNLVEGLEYENTAFSILAGGIFPEDMLA IWASLPGLFINIIFATLFLGKKLPGIREIWNIAGPQVSFGQTVAWGQYVFGILVTFLILTPYFGINPIAGALIEIGFEGG HGTAAGMASTFAEAGFPEGADLSIGLATVGLLFSVILGILLLNYGVRTGKSSILKVPDEISLKKSEQAGVVDFDARECAG KITTRPESIEPLSMHFAYVGVAIGIGYIILQILQLIEELAWGRTTGIHLLEHMPLFPLAMIGGIILEMFLDRFDTYKTLD RNLMMRIQGLSLDILIVSAIATLSLEAIGGNLAPFLILSIVGIFWNVAAFLLLAPRMIPSYWFERGMGDFGQSMGMTASG LLLMKIADPENRSPALESFGYKQLMFEPVVGGGLFTATSVPLIFNFGPVPVLIFTAVVMLFWSGLGLLYFGRK
Specific function: Unknown
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51151; Mature: 51019
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSMVGMSFLVLGIILLLGKWIRVITPNLQKLFIPSSLIGGFLALILGPQVLGNLVEGL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC EYENTAFSILAGGIFPEDMLAIWASLPGLFINIIFATLFLGKKLPGIREIWNIAGPQVSF CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC GQTVAWGQYVFGILVTFLILTPYFGINPIAGALIEIGFEGGHGTAAGMASTFAEAGFPEG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC ADLSIGLATVGLLFSVILGILLLNYGVRTGKSSILKVPDEISLKKSEQAGVVDFDARECA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHCCCCCCCCCCEECCHHHHC GKITTRPESIEPLSMHFAYVGVAIGIGYIILQILQLIEELAWGRTTGIHLLEHMPLFPLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH MIGGIILEMFLDRFDTYKTLDRNLMMRIQGLSLDILIVSAIATLSLEAIGGNLAPFLILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH IVGIFWNVAAFLLLAPRMIPSYWFERGMGDFGQSMGMTASGLLLMKIADPENRSPALESF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHHC GYKQLMFEPVVGGGLFTATSVPLIFNFGPVPVLIFTAVVMLFWSGLGLLYFGRK CHHHHHHHHHCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHEECCC >Mature Secondary Structure SPSMVGMSFLVLGIILLLGKWIRVITPNLQKLFIPSSLIGGFLALILGPQVLGNLVEGL CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC EYENTAFSILAGGIFPEDMLAIWASLPGLFINIIFATLFLGKKLPGIREIWNIAGPQVSF CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC GQTVAWGQYVFGILVTFLILTPYFGINPIAGALIEIGFEGGHGTAAGMASTFAEAGFPEG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC ADLSIGLATVGLLFSVILGILLLNYGVRTGKSSILKVPDEISLKKSEQAGVVDFDARECA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHCCCCCCCCCCEECCHHHHC GKITTRPESIEPLSMHFAYVGVAIGIGYIILQILQLIEELAWGRTTGIHLLEHMPLFPLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH MIGGIILEMFLDRFDTYKTLDRNLMMRIQGLSLDILIVSAIATLSLEAIGGNLAPFLILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH IVGIFWNVAAFLLLAPRMIPSYWFERGMGDFGQSMGMTASGLLLMKIADPENRSPALESF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHHC GYKQLMFEPVVGGGLFTATSVPLIFNFGPVPVLIFTAVVMLFWSGLGLLYFGRK CHHHHHHHHHCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA