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The map label for this gene is fni [H]

Identifier: 21227866

GI number: 21227866

Start: 2103698

End: 2104795

Strand: Direct

Name: fni [H]

Synonym: MM_1764

Alternate gene names: 21227866

Gene position: 2103698-2104795 (Clockwise)

Preceding gene: 21227865

Following gene: 21227867

Centisome position: 51.36

GC content: 50.18

Gene sequence:

>1098_bases
ATGATTAACACCACCTCCAGGCGAAAGATAGAACACCTTAAGCTCTGCGCTGAAAGCCCGGTTGAGGCCAGGCAGGTCAG
TGCTGGCTTTGAAGATGTAACCCTCATTCACAGGGCGCTTCCGGAATTAAATATGGATGAGCTTGACCTCTCTGTGGATT
TTCTTGGAAAACGCATTAAAGCTCCGTTTTTAATTGCATCAATTACAGGAGGGCACCCTGATACTATCCCTGTAAATGCT
GCACTTGCGGCTGCAGCCGAAGAACTGGGAGTCGGAATAGGGGTAGGAAGCCAGAGGGCTGCAATTGACGACCCTTCTCA
GGAAGACTCATTCAGGGTTGTCAGGGATGAAGCACCTGATGCTTTTGTCTACGGAAACGTCGGAGCTGCCCAGATCCGCC
AGTACGGTGTTGAAGGGGTCGAAAAACTCATTGAAATGATCGACGCTGATGCCCTTGCAATTCACCTAAATTTCCTTCAG
GAAGCAGTCCAGCCCGAGGGCGACAGGGATGCTACTGGCTGCCTGGATATGATCACTGAAATATGTTCCCAAATCAAAAC
TCCGGTGATCGTGAAAGAAACAGGAGCAGGCATTTCCAGGGAAGACGCTATTCTCTTCCAGAAAGCAGGAGTCTCTGCAA
TTGATGTCGGAGGAGCTGGCGGCACAAGCTGGGCAGGGGTTGAAGTTTACAGGGCAAAAGAAAGCAGGGATTCGGTTTCC
GAACGCCTCGGGGAACTTTTCTGGGATTTTGGAATTCCGACTGTTGCCAGCCTGATAGAATCAAGGGTTTCTCTCCCCCT
TATCGCAACCGGCGGCATAAGAAACGGGCTTGACATTGCAAAGTCCATAGCTCTCGGAGCCAGTGCGGCAAGTGCTGCCC
TGCCGTTTGTAGGACCTTCCCTTGAGGGGAAAGAATCAGTTGTCAGAGTGCTTTCCTGCATGCTTGAAGAATTCAAAGCT
GCGATGTTTCTCTGTGGTTGTGGAAATATAAAGGACCTGCATAACTCCCCGGTTGTCGTTACAGGGTGGACACGCGAATA
CCTTGAACAGCGCGGTTTTAATGTAAAAGACCTTTCTTTACCGGGGAACGCTCTTTAA

Upstream 100 bases:

>100_bases
CTCCTATATATTCAATGCAGGAAAAGCGGATAATATTTACAGGTTCTTGAATGGGGAATCCATAGGGACCAGGATCAGTC
CGGATAAAAGGGTATGAAGC

Downstream 100 bases:

>100_bases
TTTAAGGAACAGGAAAAAACACTTATCCCTTCCTTTATCATATCCCGTATGACCCAAAACAGATTTATCCGATCACAAAT
TATTCAATTACAGTTTTACT

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MINTTSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIKAPFLIASITGGHPDTIPVNA
ALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPDAFVYGNVGAAQIRQYGVEGVEKLIEMIDADALAIHLNFLQ
EAVQPEGDRDATGCLDMITEICSQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVS
ERLGELFWDFGIPTVASLIESRVSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPSLEGKESVVRVLSCMLEEFKA
AMFLCGCGNIKDLHNSPVVVTGWTREYLEQRGFNVKDLSLPGNAL

Sequences:

>Translated_365_residues
MINTTSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIKAPFLIASITGGHPDTIPVNA
ALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPDAFVYGNVGAAQIRQYGVEGVEKLIEMIDADALAIHLNFLQ
EAVQPEGDRDATGCLDMITEICSQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVS
ERLGELFWDFGIPTVASLIESRVSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPSLEGKESVVRVLSCMLEEFKA
AMFLCGCGNIKDLHNSPVVVTGWTREYLEQRGFNVKDLSLPGNAL
>Mature_365_residues
MINTTSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIKAPFLIASITGGHPDTIPVNA
ALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPDAFVYGNVGAAQIRQYGVEGVEKLIEMIDADALAIHLNFLQ
EAVQPEGDRDATGCLDMITEICSQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVS
ERLGELFWDFGIPTVASLIESRVSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPSLEGKESVVRVLSCMLEEFKA
AMFLCGCGNIKDLHNSPVVVTGWTREYLEQRGFNVKDLSLPGNAL

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 38790; Mature: 38790

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTTSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIK
CCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHC
APFLIASITGGHPDTIPVNAALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPD
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
AFVYGNVGAAQIRQYGVEGVEKLIEMIDADALAIHLNFLQEAVQPEGDRDATGCLDMITE
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ICSQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVS
HHHHHCCCEEEEECCCCCCCCHHHEEHHCCCCEEECCCCCCCCCCCEEEEECHHHHHHHH
ERLGELFWDFGIPTVASLIESRVSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPS
HHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCC
LEGKESVVRVLSCMLEEFKAAMFLCGCGNIKDLHNSPVVVTGWTREYLEQRGFNVKDLSL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECCHHHHHHHCCCCEEEECC
PGNAL
CCCCC
>Mature Secondary Structure
MINTTSRRKIEHLKLCAESPVEARQVSAGFEDVTLIHRALPELNMDELDLSVDFLGKRIK
CCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHC
APFLIASITGGHPDTIPVNAALAAAAEELGVGIGVGSQRAAIDDPSQEDSFRVVRDEAPD
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
AFVYGNVGAAQIRQYGVEGVEKLIEMIDADALAIHLNFLQEAVQPEGDRDATGCLDMITE
EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ICSQIKTPVIVKETGAGISREDAILFQKAGVSAIDVGGAGGTSWAGVEVYRAKESRDSVS
HHHHHCCCEEEEECCCCCCCCHHHEEHHCCCCEEECCCCCCCCCCCEEEEECHHHHHHHH
ERLGELFWDFGIPTVASLIESRVSLPLIATGGIRNGLDIAKSIALGASAASAALPFVGPS
HHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCC
LEGKESVVRVLSCMLEEFKAAMFLCGCGNIKDLHNSPVVVTGWTREYLEQRGFNVKDLSL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECCHHHHHHHCCCCEEEECC
PGNAL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]