Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227835

Identifier: 21227835

GI number: 21227835

Start: 2075197

End: 2075685

Strand: Direct

Name: 21227835

Synonym: MM_1733

Alternate gene names: NA

Gene position: 2075197-2075685 (Clockwise)

Preceding gene: 21227833

Following gene: 21227836

Centisome position: 50.66

GC content: 41.31

Gene sequence:

>489_bases
TTGGTCAGCATTATTTCTCCGGCATCGGCGTATACCTACAATGGGCGTTATTGGCATTCCGGATTTGCCCAAGTCGACAA
GGATTCCTCAATTCCAAGTTCTTGGTCAAATTCTCTGACTCAGGCTATGAGTGCGTGGAATAATGCTGGTGCAAATTTCT
TCTTTTATCAGATAGGGTGTGAAAACAAACTTTACTATACGTCACTTGGATCAAGTGGACCGCTAGCGACAACTACTGAG
ACATATAGTGGTACCTCGATGACGAAATGTATTGTAAGATTTAATAGTGATAAGAGTTGGTCTACTACAGGAGCATCAGG
ATATTTCGACGTACAAAGTGCTGCTACTCATGAATTTGGGCACTGGTTAAGTTTGGGTCATTCTAGCAATACTGAAGCAA
CAATGTACAGTACTATGTCAACAGGGGAAACAAAGAAAAGAAGTTTACACTCCGATGATATAGCAGGTATCTGCTACATT
TACCCCTAA

Upstream 100 bases:

>100_bases
GGCTTGCTCGATCTTGCCTCCTAGGAGATTAGTAGGAGGAAATAAAAATATGAAGCATAGAAAAAAAATGTTGATAGGAG
CTTTGTTGATTACGATATCA

Downstream 100 bases:

>100_bases
TAGGTGATGAATTATGACGAGTCGAAACAATGTAAAATATGGAATCGTTTTGGTTGGAGCACTCACTCTGATCGTGTTAG
GTTTAGCATTCTCCAACTCT

Product: metalloproteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVSIISPASAYTYNGRYWHSGFAQVDKDSSIPSSWSNSLTQAMSAWNNAGANFFFYQIGCENKLYYTSLGSSGPLATTTE
TYSGTSMTKCIVRFNSDKSWSTTGASGYFDVQSAATHEFGHWLSLGHSSNTEATMYSTMSTGETKKRSLHSDDIAGICYI
YP

Sequences:

>Translated_162_residues
MVSIISPASAYTYNGRYWHSGFAQVDKDSSIPSSWSNSLTQAMSAWNNAGANFFFYQIGCENKLYYTSLGSSGPLATTTE
TYSGTSMTKCIVRFNSDKSWSTTGASGYFDVQSAATHEFGHWLSLGHSSNTEATMYSTMSTGETKKRSLHSDDIAGICYI
YP
>Mature_162_residues
MVSIISPASAYTYNGRYWHSGFAQVDKDSSIPSSWSNSLTQAMSAWNNAGANFFFYQIGCENKLYYTSLGSSGPLATTTE
TYSGTSMTKCIVRFNSDKSWSTTGASGYFDVQSAATHEFGHWLSLGHSSNTEATMYSTMSTGETKKRSLHSDDIAGICYI
YP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17729; Mature: 17729

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIISPASAYTYNGRYWHSGFAQVDKDSSIPSSWSNSLTQAMSAWNNAGANFFFYQIGC
CCEEECCCCCEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
ENKLYYTSLGSSGPLATTTETYSGTSMTKCIVRFNSDKSWSTTGASGYFDVQSAATHEFG
CCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHCC
HWLSLGHSSNTEATMYSTMSTGETKKRSLHSDDIAGICYIYP
CEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MVSIISPASAYTYNGRYWHSGFAQVDKDSSIPSSWSNSLTQAMSAWNNAGANFFFYQIGC
CCEEECCCCCEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECC
ENKLYYTSLGSSGPLATTTETYSGTSMTKCIVRFNSDKSWSTTGASGYFDVQSAATHEFG
CCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCHHHHHHCC
HWLSLGHSSNTEATMYSTMSTGETKKRSLHSDDIAGICYIYP
CEEECCCCCCCCEEEEEECCCCCHHHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA