Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227824

Identifier: 21227824

GI number: 21227824

Start: 2066302

End: 2067339

Strand: Direct

Name: 21227824

Synonym: MM_1722

Alternate gene names: NA

Gene position: 2066302-2067339 (Clockwise)

Preceding gene: 21227822

Following gene: 21227825

Centisome position: 50.44

GC content: 39.6

Gene sequence:

>1038_bases
GTGCCAGCAGTAAGTGCACAAGAAGTGATTGAGCAGAAGCTTACCTTTGGCCCGGAAACTCTTGAAGAATTGAAAAATGA
TCCGAATTTTATTGCTGCTTATGGAAATATACCTACTTTTGAAAGTTTGGAAGAAAGGGAAAAGTGGCTTGATACGCTTG
ATAAAATATATACTGAAGTTAACGACAATTTTGAAAAAGAAATGTCAAAGTATTTCTATCCAAATGGTCCTGTTATAGCC
TATGGTTACACCATTGATGGCGTTCTTAAGGTTGCAATCGAAAAAGGACAAAAAATCGATGCAGCTAAAGAAAATGAGCT
CTATGATCTATTTTCTAACTATGGGCAAAATATTGCCGTAAAAGATGTTCCATTAATAATTGTATATGAAGACCTTCCTA
CGCCAACTAGTCGTACTAGCTCATGGCGTCCGATAATCGGAGGAATAAAAATATGCACAGAAAAACCAGATGGAATTAAG
CAATCAACCCTTGGTTTTTCTGCACAAACTAGTAGTGGAACTAAAGGTTATGTTGTTGCAGGACATACTGCACCATCTAT
TGGGGATCAAATATGGCAACCTACTGCTGGGCCGAGTGCTAACAAAGTCGGAACAGTGAGTAAAGTTGGGGGACATTATG
CAGATGCCTCATGGGTTCCATATTCTAACGTAGCTGCAAAGATATACGATACAGATACGGATGTGCTAAAAGATGTAAAA
TCACATGAGAATGCCGCTATAGGAGATACAGTTTATAAATCGGGTATCACGACAGGAAGGAGTTATGGAAGCGTTACTGA
GATTAGAACATCGTACGATAACCCTCTTGGTACTTTGTATAGACAATATGTTGCAGGATATAACTGCGACGGTGGAGACA
GTGGTGCCCCTGTATACGTTTATGTTAGTGGCGGTGTTAAAATTGTGGGAATCCATTGGGGAGGAGTAGGAACATATAAT
TCAGGCTACTCGACTTCAATATTTTCTCCAGTGTCTGGAGTGCAGTCTGATTTAGGTGTAACTCCTCTTACAGCATAA

Upstream 100 bases:

>100_bases
ATCTTGCCTCCTGGGAATGAACAGGAGTGAGTATGAAATGAAGAAAAAATTTGTATTAAGTTTACTGCTTGCCACAATGC
TGCTGATGAGCATGGCTGTT

Downstream 100 bases:

>100_bases
ATATGCAGTTAGAAACATTGCTCAGATTTCCACCTTGAAATAATGCGATATAAATTATATGCAGCAATATCGCATTATTC
AAATTGGAATGATACTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MPAVSAQEVIEQKLTFGPETLEELKNDPNFIAAYGNIPTFESLEEREKWLDTLDKIYTEVNDNFEKEMSKYFYPNGPVIA
YGYTIDGVLKVAIEKGQKIDAAKENELYDLFSNYGQNIAVKDVPLIIVYEDLPTPTSRTSSWRPIIGGIKICTEKPDGIK
QSTLGFSAQTSSGTKGYVVAGHTAPSIGDQIWQPTAGPSANKVGTVSKVGGHYADASWVPYSNVAAKIYDTDTDVLKDVK
SHENAAIGDTVYKSGITTGRSYGSVTEIRTSYDNPLGTLYRQYVAGYNCDGGDSGAPVYVYVSGGVKIVGIHWGGVGTYN
SGYSTSIFSPVSGVQSDLGVTPLTA

Sequences:

>Translated_345_residues
MPAVSAQEVIEQKLTFGPETLEELKNDPNFIAAYGNIPTFESLEEREKWLDTLDKIYTEVNDNFEKEMSKYFYPNGPVIA
YGYTIDGVLKVAIEKGQKIDAAKENELYDLFSNYGQNIAVKDVPLIIVYEDLPTPTSRTSSWRPIIGGIKICTEKPDGIK
QSTLGFSAQTSSGTKGYVVAGHTAPSIGDQIWQPTAGPSANKVGTVSKVGGHYADASWVPYSNVAAKIYDTDTDVLKDVK
SHENAAIGDTVYKSGITTGRSYGSVTEIRTSYDNPLGTLYRQYVAGYNCDGGDSGAPVYVYVSGGVKIVGIHWGGVGTYN
SGYSTSIFSPVSGVQSDLGVTPLTA
>Mature_344_residues
PAVSAQEVIEQKLTFGPETLEELKNDPNFIAAYGNIPTFESLEEREKWLDTLDKIYTEVNDNFEKEMSKYFYPNGPVIAY
GYTIDGVLKVAIEKGQKIDAAKENELYDLFSNYGQNIAVKDVPLIIVYEDLPTPTSRTSSWRPIIGGIKICTEKPDGIKQ
STLGFSAQTSSGTKGYVVAGHTAPSIGDQIWQPTAGPSANKVGTVSKVGGHYADASWVPYSNVAAKIYDTDTDVLKDVKS
HENAAIGDTVYKSGITTGRSYGSVTEIRTSYDNPLGTLYRQYVAGYNCDGGDSGAPVYVYVSGGVKIVGIHWGGVGTYNS
GYSTSIFSPVSGVQSDLGVTPLTA

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37191; Mature: 37059

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVSAQEVIEQKLTFGPETLEELKNDPNFIAAYGNIPTFESLEEREKWLDTLDKIYTEV
CCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NDNFEKEMSKYFYPNGPVIAYGYTIDGVLKVAIEKGQKIDAAKENELYDLFSNYGQNIAV
CCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEE
KDVPLIIVYEDLPTPTSRTSSWRPIIGGIKICTEKPDGIKQSTLGFSAQTSSGTKGYVVA
ECCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCEECCCCCCCCEEEE
GHTAPSIGDQIWQPTAGPSANKVGTVSKVGGHYADASWVPYSNVAAKIYDTDTDVLKDVK
CCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
SHENAAIGDTVYKSGITTGRSYGSVTEIRTSYDNPLGTLYRQYVAGYNCDGGDSGAPVYV
HCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
YVSGGVKIVGIHWGGVGTYNSGYSTSIFSPVSGVQSDLGVTPLTA
EEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PAVSAQEVIEQKLTFGPETLEELKNDPNFIAAYGNIPTFESLEEREKWLDTLDKIYTEV
CCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NDNFEKEMSKYFYPNGPVIAYGYTIDGVLKVAIEKGQKIDAAKENELYDLFSNYGQNIAV
CCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEE
KDVPLIIVYEDLPTPTSRTSSWRPIIGGIKICTEKPDGIKQSTLGFSAQTSSGTKGYVVA
ECCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCCCEECCCCCCCCEEEE
GHTAPSIGDQIWQPTAGPSANKVGTVSKVGGHYADASWVPYSNVAAKIYDTDTDVLKDVK
CCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
SHENAAIGDTVYKSGITTGRSYGSVTEIRTSYDNPLGTLYRQYVAGYNCDGGDSGAPVYV
HCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
YVSGGVKIVGIHWGGVGTYNSGYSTSIFSPVSGVQSDLGVTPLTA
EEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA