Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is dapH [H]

Identifier: 21227741

GI number: 21227741

Start: 1954521

End: 1954973

Strand: Direct

Name: dapH [H]

Synonym: MM_1639

Alternate gene names: 21227741

Gene position: 1954521-1954973 (Clockwise)

Preceding gene: 21227740

Following gene: 21227742

Centisome position: 47.71

GC content: 39.96

Gene sequence:

>453_bases
GTGATAAAATTCTATTTCCGTTACGCATTTAACTGGATATTACAAACAATGGCTAAAATTAGTCCTCATTACGGAATATC
TGTAAAACTCCAGCGGATGAGAGGTGTAAATATCGGGAAACACGTATTTCTGGGGCCTGGTGTCAATCTCGATGATCTAT
ACCCTGAATTAATTACAATTGAAGATTACGTCGGTATCGGAATGGGAACAATGATATTTGCGCATTCTAATCCCACCTGT
TCCCCGTATCTTAAAACAAAGTACTATCCGAGGGAAGTAAAACCTGTAACTATAAAAAGTGGGGCATGGATTGCGCCCGG
GAGCATAATTCTTGCAGGTATTACAATTGGGGAACATAGTGTTGTTGGCGCCGGGAGTATGGTTATGAAAAACGTAGAAC
CTTATACGGTTGTAATTGGGTGTCCTGCTAAGGTTCTAAAGAAACTTGAATAA

Upstream 100 bases:

>100_bases
AATGGAACGCTTTGAGGAAGCTAGCATACGTATGGAATGCCCTGAAAAAATTAACGAAAGAGAACTTATGGAGTATTATG
GTTACACCGGTTCATTCGGG

Downstream 100 bases:

>100_bases
TTAGTGCGGTTTACTTTGGGGATTTCTGGGGGGTTAAGAATGATTAATGCACTAAGTTTTGATCTGGAGTACTGGTATAC
AGCAGAACTTGTTTGCAGAT

Product: putative acetyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC
SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE

Sequences:

>Translated_150_residues
MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC
SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE
>Mature_150_residues
MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITIEDYVGIGMGTMIFAHSNPTC
SPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHSVVGAGSMVMKNVEPYTVVIGCPAKVLKKLE

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013710
- InterPro:   IPR001451
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004 [H]

Pfam domain/function: PF08503 DapD_N; PF00132 Hexapep [H]

EC number: =2.3.1.89 [H]

Molecular weight: Translated: 16609; Mature: 16609

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITI
CEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCEEEE
EDYVGIGMGTMIFAHSNPTCSPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHS
CHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEEEECCCC
VVGAGSMVMKNVEPYTVVIGCPAKVLKKLE
EECCCHHEECCCCCEEEEEECHHHHHHHCC
>Mature Secondary Structure
MIKFYFRYAFNWILQTMAKISPHYGISVKLQRMRGVNIGKHVFLGPGVNLDDLYPELITI
CEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCCEEEE
EDYVGIGMGTMIFAHSNPTCSPYLKTKYYPREVKPVTIKSGAWIAPGSIILAGITIGEHS
CHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCEEEEEEEECCCC
VVGAGSMVMKNVEPYTVVIGCPAKVLKKLE
EECCCHHEECCCCCEEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA