Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227727

Identifier: 21227727

GI number: 21227727

Start: 1937056

End: 1937385

Strand: Reverse

Name: 21227727

Synonym: MM_1625

Alternate gene names: NA

Gene position: 1937385-1937056 (Counterclockwise)

Preceding gene: 21227729

Following gene: 21227724

Centisome position: 47.3

GC content: 40.0

Gene sequence:

>330_bases
ATGGAATCTACCGGAGATTCCAGTAACTGGTGTGCTGTGGGATCTTCCTGGAAATCAACAAACCCCCAGACAGGTGAAGA
AGTTGAAATGAAAATCACAGGAATGGAAACCGTTGACGGAATTCCTATGTGTAAAGCAGTTTATGAGACAAACATCGACG
ATGAAGATTTCTCCAAAATCGAATATATGTGGTCAGAAAACGGGGAAACTTATTTCTGGACTGCTTATGATAAATCAGGA
GAGGTAGTTTCCGAAATGAGCATGAAAGACGGCAAAATGAAAATAGTTGATGAAGAAGGCAATGTAATGGAGTATTCACA
GGGACAATAA

Upstream 100 bases:

>100_bases
GTGCAGTGAAAACACCGAAGAAGATATGAATGTGCCTGAAGAGTCAGCCGAAGACAGCGAAGAAGAGTCTCCTGATGAGG
ATGAAGAAGTAAAAGTTGAG

Downstream 100 bases:

>100_bases
AACGATAAAGAAAAAACAATAAAATATAGAGATTGCGATAAAGAACTGAAAATTGTGCTAGATTACCAGCACTTTTTATT
TAATTAAATTTGTAACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MESTGDSSNWCAVGSSWKSTNPQTGEEVEMKITGMETVDGIPMCKAVYETNIDDEDFSKIEYMWSENGETYFWTAYDKSG
EVVSEMSMKDGKMKIVDEEGNVMEYSQGQ

Sequences:

>Translated_109_residues
MESTGDSSNWCAVGSSWKSTNPQTGEEVEMKITGMETVDGIPMCKAVYETNIDDEDFSKIEYMWSENGETYFWTAYDKSG
EVVSEMSMKDGKMKIVDEEGNVMEYSQGQ
>Mature_109_residues
MESTGDSSNWCAVGSSWKSTNPQTGEEVEMKITGMETVDGIPMCKAVYETNIDDEDFSKIEYMWSENGETYFWTAYDKSG
EVVSEMSMKDGKMKIVDEEGNVMEYSQGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12289; Mature: 12289

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTGDSSNWCAVGSSWKSTNPQTGEEVEMKITGMETVDGIPMCKAVYETNIDDEDFSKI
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
EYMWSENGETYFWTAYDKSGEVVSEMSMKDGKMKIVDEEGNVMEYSQGQ
EEEECCCCCEEEEEEECCCCCEEECCCCCCCCEEEEECCCCEEECCCCC
>Mature Secondary Structure
MESTGDSSNWCAVGSSWKSTNPQTGEEVEMKITGMETVDGIPMCKAVYETNIDDEDFSKI
CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEE
EYMWSENGETYFWTAYDKSGEVVSEMSMKDGKMKIVDEEGNVMEYSQGQ
EEEECCCCCEEEEEEECCCCCEEECCCCCCCCEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA