| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is zupT [H]
Identifier: 21227701
GI number: 21227701
Start: 1902064
End: 1902831
Strand: Direct
Name: zupT [H]
Synonym: MM_1599
Alternate gene names: 21227701
Gene position: 1902064-1902831 (Clockwise)
Preceding gene: 21227700
Following gene: 21227703
Centisome position: 46.43
GC content: 45.05
Gene sequence:
>768_bases ATGGGAGATGTCACAACTGCTTTTATTCTCACAACATGTGCAGGACTCTCAACCGGTACTGGCAGTCTCATAGCTTTTTT GGTTCCCAATCTAAAGTTTACCTGGCTGTCCATGCTGCTTGGTTTTGCTGCGGGGGCAATGATCTATATCTCATTTGTAG ATTTACTTGCTGAATCTGTTGGTGCAGTTGGTTTTTTCCAGGCAAATGCTGCTTTTTTTCTGGGGATGCTGGGGATGGGA ATTCTTGACCGCGTGATAGAGCACATTCATACGGATACTCTCCCTGATAGAAACACTCTTTCCCGGAGTGAAGAGAATGA CCTTCAAAAAGCCGGCCTGCTGACTGCAGCAGGAATTGCCATGCACAACTTCCCTGAAGGAATTGCAGTGTTAGCTGCGT CCCTGGGTTCTCCTTATCTGGGGTTTTCGGTTGCTCTGGCCATAGCAATCCATAACATCCCTGAAGGAATTGCAGTTTCG GTTCCTATCTATTATGCCAGTGGTGACCGAAAAAAAGCGTTTGCTTATTCTTTCTTTGCAGGGCTTACCGAACCTCTGGG AGCTGTGTTTGCATATTTTTTTCTTTTCCGCTTTCTATCTCCTGAAATGCTTTTCCTTATGCTCGCTGCGGTCGGAGGGG TAATGGTCTTTATATGTTTTGATGAACTGCTGCCGATCTCCATAAAATATGGAAACGAGCATCTGACTTTTCTGGGGGTA TTTTCTGGAATGTCTGTTATCGCTCTGAGCCTTTATCTTATACATTGA
Upstream 100 bases:
>100_bases ATATTTATTAATTTACTTTATATAAAACTCTCCCGTATTTGTCTTTTCTTTTTCTATGAATTTAAATCCTATCCCGTATT TTATTTATTGGGGGAGCTAA
Downstream 100 bases:
>100_bases AATTTTTGAGGCTTTTTTCCCAAAAGCTAACAATCATTATCCAAAAGCTGCATTTTATGTATCATTTCCCTTATCTCTCG ATTGTTAAATTTTCAACTGG
Product: zinc transporter ZupT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MGDVTTAFILTTCAGLSTGTGSLIAFLVPNLKFTWLSMLLGFAAGAMIYISFVDLLAESVGAVGFFQANAAFFLGMLGMG ILDRVIEHIHTDTLPDRNTLSRSEENDLQKAGLLTAAGIAMHNFPEGIAVLAASLGSPYLGFSVALAIAIHNIPEGIAVS VPIYYASGDRKKAFAYSFFAGLTEPLGAVFAYFFLFRFLSPEMLFLMLAAVGGVMVFICFDELLPISIKYGNEHLTFLGV FSGMSVIALSLYLIH
Sequences:
>Translated_255_residues MGDVTTAFILTTCAGLSTGTGSLIAFLVPNLKFTWLSMLLGFAAGAMIYISFVDLLAESVGAVGFFQANAAFFLGMLGMG ILDRVIEHIHTDTLPDRNTLSRSEENDLQKAGLLTAAGIAMHNFPEGIAVLAASLGSPYLGFSVALAIAIHNIPEGIAVS VPIYYASGDRKKAFAYSFFAGLTEPLGAVFAYFFLFRFLSPEMLFLMLAAVGGVMVFICFDELLPISIKYGNEHLTFLGV FSGMSVIALSLYLIH >Mature_254_residues GDVTTAFILTTCAGLSTGTGSLIAFLVPNLKFTWLSMLLGFAAGAMIYISFVDLLAESVGAVGFFQANAAFFLGMLGMGI LDRVIEHIHTDTLPDRNTLSRSEENDLQKAGLLTAAGIAMHNFPEGIAVLAASLGSPYLGFSVALAIAIHNIPEGIAVSV PIYYASGDRKKAFAYSFFAGLTEPLGAVFAYFFLFRFLSPEMLFLMLAAVGGVMVFICFDELLPISIKYGNEHLTFLGVF SGMSVIALSLYLIH
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577422, Length=152, Percent_Identity=32.8947368421053, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI229577418, Length=152, Percent_Identity=32.8947368421053, Blast_Score=71, Evalue=9e-13, Organism=Escherichia coli, GI1789419, Length=254, Percent_Identity=35.8267716535433, Blast_Score=146, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507805, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24652846, Length=164, Percent_Identity=31.7073170731707, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 27267; Mature: 27136
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVTTAFILTTCAGLSTGTGSLIAFLVPNLKFTWLSMLLGFAAGAMIYISFVDLLAESV CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVGFFQANAAFFLGMLGMGILDRVIEHIHTDTLPDRNTLSRSEENDLQKAGLLTAAGIA CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH MHNFPEGIAVLAASLGSPYLGFSVALAIAIHNIPEGIAVSVPIYYASGDRKKAFAYSFFA HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHH GLTEPLGAVFAYFFLFRFLSPEMLFLMLAAVGGVMVFICFDELLPISIKYGNEHLTFLGV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEHHH FSGMSVIALSLYLIH HHHHHHHHHHHHHCC >Mature Secondary Structure GDVTTAFILTTCAGLSTGTGSLIAFLVPNLKFTWLSMLLGFAAGAMIYISFVDLLAESV CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVGFFQANAAFFLGMLGMGILDRVIEHIHTDTLPDRNTLSRSEENDLQKAGLLTAAGIA CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH MHNFPEGIAVLAASLGSPYLGFSVALAIAIHNIPEGIAVSVPIYYASGDRKKAFAYSFFA HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHH GLTEPLGAVFAYFFLFRFLSPEMLFLMLAAVGGVMVFICFDELLPISIKYGNEHLTFLGV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEHHH FSGMSVIALSLYLIH HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]