| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227697
Identifier: 21227697
GI number: 21227697
Start: 1899191
End: 1899736
Strand: Reverse
Name: 21227697
Synonym: MM_1595
Alternate gene names: NA
Gene position: 1899736-1899191 (Counterclockwise)
Preceding gene: 21227702
Following gene: 21227691
Centisome position: 46.38
GC content: 40.84
Gene sequence:
>546_bases ATGGTAGTAAGTGTTATGCGAGATCCAGGAATTAACGGAGGTAGAGAAAACCTCTTTAAAGCAATTTCAAGCGATACACG CCTTTCAATTCTTGAGAGCCTGAGTGAAGGAGAAAAACATATTTCAGGTCTTGCAAGGGAGATAGGCATTTCGGTACCAG TAGCAGCTAAACATGTGAAAGTGCTGGAAAAAGCCGAACTTGTGGAAAGAAAAAAGTTCGGAAATACCCATATGATAGGC ATAAAACTGAGCAATGTCTATTCTTTCCTTGACCGTTTTGCAGAAAACAGGCAGATTGAGGTAGAAGAAGGCACGAATTT GCTTGAAGCTCTGAAAAGTGTGGCAGCTGTTGAGGTAATGAAAATGGGAGACAGGATGAAAGTTGTCTCTACGGATGGGG AAGAGGGCTTTTATGTATATGAGGTGGACGGCAAATTTTCGGATAAAACCGTAGATGAATACGAGTTTCATGAAGATTCG GTTGTTGAATGGAAGAAGCTGATTCCGGTCACGAAAAAAAGGCTGTTTGTAAATATAAGAAGGTAA
Upstream 100 bases:
>100_bases GATCTATAAATAAAAAGAATAATAGAAGACAGGAAGATATACATTACTTGAGTTAAAAGGGAAATAATTATAAGTACTTA GGGTAAAATAGAGGATCATC
Downstream 100 bases:
>100_bases AGCAGCCCTTAAGGACCAGCTTTTAATAACTCGAAAAAGTCGTCTTATAGTACCTCTGCTAAAGTAACTTCATACTACCA TTCAAAAAGTCCTGACCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MVVSVMRDPGINGGRENLFKAISSDTRLSILESLSEGEKHISGLAREIGISVPVAAKHVKVLEKAELVERKKFGNTHMIG IKLSNVYSFLDRFAENRQIEVEEGTNLLEALKSVAAVEVMKMGDRMKVVSTDGEEGFYVYEVDGKFSDKTVDEYEFHEDS VVEWKKLIPVTKKRLFVNIRR
Sequences:
>Translated_181_residues MVVSVMRDPGINGGRENLFKAISSDTRLSILESLSEGEKHISGLAREIGISVPVAAKHVKVLEKAELVERKKFGNTHMIG IKLSNVYSFLDRFAENRQIEVEEGTNLLEALKSVAAVEVMKMGDRMKVVSTDGEEGFYVYEVDGKFSDKTVDEYEFHEDS VVEWKKLIPVTKKRLFVNIRR >Mature_181_residues MVVSVMRDPGINGGRENLFKAISSDTRLSILESLSEGEKHISGLAREIGISVPVAAKHVKVLEKAELVERKKFGNTHMIG IKLSNVYSFLDRFAENRQIEVEEGTNLLEALKSVAAVEVMKMGDRMKVVSTDGEEGFYVYEVDGKFSDKTVDEYEFHEDS VVEWKKLIPVTKKRLFVNIRR
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20450; Mature: 20450
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSVMRDPGINGGRENLFKAISSDTRLSILESLSEGEKHISGLAREIGISVPVAAKHVK CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VLEKAELVERKKFGNTHMIGIKLSNVYSFLDRFAENRQIEVEEGTNLLEALKSVAAVEVM HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHH KMGDRMKVVSTDGEEGFYVYEVDGKFSDKTVDEYEFHEDSVVEWKKLIPVTKKRLFVNIR HCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEEC R C >Mature Secondary Structure MVVSVMRDPGINGGRENLFKAISSDTRLSILESLSEGEKHISGLAREIGISVPVAAKHVK CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VLEKAELVERKKFGNTHMIGIKLSNVYSFLDRFAENRQIEVEEGTNLLEALKSVAAVEVM HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHHHH KMGDRMKVVSTDGEEGFYVYEVDGKFSDKTVDEYEFHEDSVVEWKKLIPVTKKRLFVNIR HCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA