Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227685

Identifier: 21227685

GI number: 21227685

Start: 1883921

End: 1884211

Strand: Reverse

Name: 21227685

Synonym: MM_1583

Alternate gene names: NA

Gene position: 1884211-1883921 (Counterclockwise)

Preceding gene: 21227686

Following gene: 21227684

Centisome position: 46.0

GC content: 35.74

Gene sequence:

>291_bases
TTGGCTATAAGGGTTGTTGCAAAAAATCAGGTAAAACCTGAAAAGGTTCAGGAATTTATGAATTTGTGTAAAAGCCTTAT
TGAAGAGACGCTAAAAGAGGAAGGCTGCATAGATTATGGGGTATATCAGGAATTGGAGAATCCTGAAATCCTGACAATGT
TAGAAGAGTGGAAAGACGAGGGCAGCCTTGATCAACATATAAGATCCGATCATTTTAAAGAGATATTTCCTTTGCTTTCA
GAGTGTCTTGACAAAGAAACTGAAATCAATATATACAGAAAAAAGCTGTAA

Upstream 100 bases:

>100_bases
GGTACAGGGAAGAGAAAGTCTACAATAACAGATACGGTCAAAAAAGAGAATAATTCTGCAAATACTGGCAGATCAGGACT
ATTTTCAGGCTGGTGATTTA

Downstream 100 bases:

>100_bases
TTTATTATATTTCAGTCCTTAAATTATATTTTCACTCATTTTTTGAAGGAATGAGTCAGGAGTACTCGGGAGAGAAAAAT
AATGAAAGTTGTTGCATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidyl-TRNA Hydrolase

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDEGSLDQHIRSDHFKEIFPLLS
ECLDKETEINIYRKKL

Sequences:

>Translated_96_residues
MAIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDEGSLDQHIRSDHFKEIFPLLS
ECLDKETEINIYRKKL
>Mature_95_residues
AIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDEGSLDQHIRSDHFKEIFPLLSE
CLDKETEINIYRKKL

Specific function: Unknown

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11375; Mature: 11244

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDE
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCC
GSLDQHIRSDHFKEIFPLLSECLDKETEINIYRKKL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
AIRVVAKNQVKPEKVQEFMNLCKSLIEETLKEEGCIDYGVYQELENPEILTMLEEWKDE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCC
GSLDQHIRSDHFKEIFPLLSECLDKETEINIYRKKL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA