Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227677

Identifier: 21227677

GI number: 21227677

Start: 1876669

End: 1877658

Strand: Direct

Name: 21227677

Synonym: MM_1575

Alternate gene names: NA

Gene position: 1876669-1877658 (Clockwise)

Preceding gene: 21227675

Following gene: 21227688

Centisome position: 45.81

GC content: 40.51

Gene sequence:

>990_bases
ATGATCAAAAGAAGGAATACTGGCAAATGGTTAATGCTTATAATTTCTGCTTTTATTTTATTATGCAGTTTCGCAGGTGC
AGATGACAGTGAATTTAACGATTCCGAATCAGATGAGCCCCCAGATTCTATAAAGAAATTTGCAAATAACCCCTTGTTCA
TAGCATACAGGGGAACTATACCAGAAACTGTCAATCAGGAGTGGAAAAATTCAATTACAGATTGCTGGCTAAATCTTAAC
AAAATAGGGCCTTCATATTCCGAATTTGACCGCTCTATATCAGGCGTTGCTGCCAGTGATGTAATTATAGTGGAATTGGG
ATCTGCCTATAAAGGAGAAGTAGATGACTCAAGAATTGACGCGATGTATTTGAAAATTGAGGAATATTGCGAAGAGCAGG
AGGGAATAAGTGATATCCCTGTGATTTTTATGTGGGCACAGGACGAGGAGGATCTCCCGCTACCTGACTACGGACCTCAG
ATTTTCGAGGAAGTTAAAAATGAGCCCGGGTTCATAGCCACTCGGGGAACAATGCCTGTAGTTACAGATTCCAGTGGAAA
AGTGGAGTGGGAAGAGAAAGCACGGGATTGTATCCATAGTTTCAGAACTGAACTTCGGCCCTACATGAAGTCATCTGGTG
GACCATTGACTGGGTATGGCTATAATTATAGGGGATATATATCCGTAGGACTTGATCCAGAATCTCCAGAAAGTGTTAAT
GATTCTATAATTGATGAAATTTATCTAATAATCGAGGAACACTGTAAACAGGAAGGTATAAGTGAGGTACCAGTAGTGTT
CGAGTGGATGGGAGTGCCAGTTGAAGACATAGCAGTAGTTGATGGACCATATGTGGATGAAGCTGATAACACCAACTTCT
CAGGCAATGAAGAGGAGATTGCTGGTAACGAAACAACCAATCAAATACCTGGCTTTACTTCGGTAATGTTCATTTTGGGA
CTTTTATCATTGCTAATAATCAAGCGTTAA

Upstream 100 bases:

>100_bases
ATCATACTGTATTTCACTAATGCGCAGATGCTTGATTTTGAGCTCAGTTTAATACAATAATAAGACTGGAGTTCTAAACT
AACTGTTAAGGTCTGATTAA

Downstream 100 bases:

>100_bases
TAACATTCTTTTTTAAGCTCTTTTTGCCAGTTTCTTTAAATTTTTCTGGCTTTCTTCCCCTTTTTTTCAACATAGTTATT
TTTCTTCTCGTTTTCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIKRRNTGKWLMLIISAFILLCSFAGADDSEFNDSESDEPPDSIKKFANNPLFIAYRGTIPETVNQEWKNSITDCWLNLN
KIGPSYSEFDRSISGVAASDVIIVELGSAYKGEVDDSRIDAMYLKIEEYCEEQEGISDIPVIFMWAQDEEDLPLPDYGPQ
IFEEVKNEPGFIATRGTMPVVTDSSGKVEWEEKARDCIHSFRTELRPYMKSSGGPLTGYGYNYRGYISVGLDPESPESVN
DSIIDEIYLIIEEHCKQEGISEVPVVFEWMGVPVEDIAVVDGPYVDEADNTNFSGNEEEIAGNETTNQIPGFTSVMFILG
LLSLLIIKR

Sequences:

>Translated_329_residues
MIKRRNTGKWLMLIISAFILLCSFAGADDSEFNDSESDEPPDSIKKFANNPLFIAYRGTIPETVNQEWKNSITDCWLNLN
KIGPSYSEFDRSISGVAASDVIIVELGSAYKGEVDDSRIDAMYLKIEEYCEEQEGISDIPVIFMWAQDEEDLPLPDYGPQ
IFEEVKNEPGFIATRGTMPVVTDSSGKVEWEEKARDCIHSFRTELRPYMKSSGGPLTGYGYNYRGYISVGLDPESPESVN
DSIIDEIYLIIEEHCKQEGISEVPVVFEWMGVPVEDIAVVDGPYVDEADNTNFSGNEEEIAGNETTNQIPGFTSVMFILG
LLSLLIIKR
>Mature_329_residues
MIKRRNTGKWLMLIISAFILLCSFAGADDSEFNDSESDEPPDSIKKFANNPLFIAYRGTIPETVNQEWKNSITDCWLNLN
KIGPSYSEFDRSISGVAASDVIIVELGSAYKGEVDDSRIDAMYLKIEEYCEEQEGISDIPVIFMWAQDEEDLPLPDYGPQ
IFEEVKNEPGFIATRGTMPVVTDSSGKVEWEEKARDCIHSFRTELRPYMKSSGGPLTGYGYNYRGYISVGLDPESPESVN
DSIIDEIYLIIEEHCKQEGISEVPVVFEWMGVPVEDIAVVDGPYVDEADNTNFSGNEEEIAGNETTNQIPGFTSVMFILG
LLSLLIIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36844; Mature: 36844

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: PS00067 3HCDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRRNTGKWLMLIISAFILLCSFAGADDSEFNDSESDEPPDSIKKFANNPLFIAYRGTI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCC
PETVNQEWKNSITDCWLNLNKIGPSYSEFDRSISGVAASDVIIVELGSAYKGEVDDSRID
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHH
AMYLKIEEYCEEQEGISDIPVIFMWAQDEEDLPLPDYGPQIFEEVKNEPGFIATRGTMPV
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCEE
VTDSSGKVEWEEKARDCIHSFRTELRPYMKSSGGPLTGYGYNYRGYISVGLDPESPESVN
EECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
DSIIDEIYLIIEEHCKQEGISEVPVVFEWMGVPVEDIAVVDGPYVDEADNTNFSGNEEEI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCHHHC
AGNETTNQIPGFTSVMFILGLLSLLIIKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKRRNTGKWLMLIISAFILLCSFAGADDSEFNDSESDEPPDSIKKFANNPLFIAYRGTI
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCC
PETVNQEWKNSITDCWLNLNKIGPSYSEFDRSISGVAASDVIIVELGSAYKGEVDDSRID
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHH
AMYLKIEEYCEEQEGISDIPVIFMWAQDEEDLPLPDYGPQIFEEVKNEPGFIATRGTMPV
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCEE
VTDSSGKVEWEEKARDCIHSFRTELRPYMKSSGGPLTGYGYNYRGYISVGLDPESPESVN
EECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
DSIIDEIYLIIEEHCKQEGISEVPVVFEWMGVPVEDIAVVDGPYVDEADNTNFSGNEEEI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCHHHC
AGNETTNQIPGFTSVMFILGLLSLLIIKR
CCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA