Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is bp26 [H]

Identifier: 21227673

GI number: 21227673

Start: 1871428

End: 1872177

Strand: Direct

Name: bp26 [H]

Synonym: MM_1571

Alternate gene names: 21227673

Gene position: 1871428-1872177 (Clockwise)

Preceding gene: 21227671

Following gene: 21227675

Centisome position: 45.69

GC content: 43.73

Gene sequence:

>750_bases
ATGCCACAGGAAAATAAAAACGATAAATCTTATTATGTTATCATTGCGCTGTCAGTTGTTCTGGTGCTGATGGCAGCAAC
GATATATGCCATTTCACAGAATGAGCCTGAAAAGGATGCGGAAAATACTATTTCCATGAGCGGGTATGCTGAACAGAAGG
TTGTCCCTGACACGGCAACAATGAGAATAGGTGTTGTGATCCAGGCTGCTACTGCGAAGGAAGCATCCGACGAAAATGCA
GCCATTATGAGCAATATAGTATCAGAGCTCAAAGCAATTGGATTGCAGGACAGGGAAATACAGACCTCCTATGTGTCCGT
ATACCCTATATACAGCTATGATACGACACAAAAAATTACAGGTTACGCAGCATCCAATAGCGTGCAGATCACAACCACAA
ATCTCGACAACCTGAGTCAGATTATTGACAGGTCCACAGCTGCCGGAGCTAATGAGATTGGAAGCATTTCATTCTCAGTA
TCCGATGATATGCAAAAGCAGCTTCGTGAGGACCTGATGAATGAGGCAATCAATGACGCATCATCAAAAGCCGATACGCT
TGCTAAGAGCCTGGGTGTTGAGATTACTGGTGTGAAGACTTCATCTATAAGTGAAAGCAACGGGCCCAGAGTATATTATG
AATACGATATGGCAGTAGAAGAAAAGGCTTCCGGAGCAGTTTCCACTCCTATTGAGCCAGGCGAATCTACTGTCTCGATG
TCAGTACAGGTCACGTACTACATTAAATAA

Upstream 100 bases:

>100_bases
AAGTTTAAGCAATTCTTTAATATGTGCGTGTACATCTATGACTTGCTATAATTGACCGAACCGCCAGCAAATAAAGTACT
GAGCAAGGAGTATGTGAAAA

Downstream 100 bases:

>100_bases
GAAATCTGTAAATAAGAAATCCGGACCAGGGAGTCTGACCGCTTAAATGTACAGGTGACCGGGAGTTGCAGATGACGGAT
GTTGTTTGCGATTTCTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPQENKNDKSYYVIIALSVVLVLMAATIYAISQNEPEKDAENTISMSGYAEQKVVPDTATMRIGVVIQAATAKEASDENA
AIMSNIVSELKAIGLQDREIQTSYVSVYPIYSYDTTQKITGYAASNSVQITTTNLDNLSQIIDRSTAAGANEIGSISFSV
SDDMQKQLREDLMNEAINDASSKADTLAKSLGVEITGVKTSSISESNGPRVYYEYDMAVEEKASGAVSTPIEPGESTVSM
SVQVTYYIK

Sequences:

>Translated_249_residues
MPQENKNDKSYYVIIALSVVLVLMAATIYAISQNEPEKDAENTISMSGYAEQKVVPDTATMRIGVVIQAATAKEASDENA
AIMSNIVSELKAIGLQDREIQTSYVSVYPIYSYDTTQKITGYAASNSVQITTTNLDNLSQIIDRSTAAGANEIGSISFSV
SDDMQKQLREDLMNEAINDASSKADTLAKSLGVEITGVKTSSISESNGPRVYYEYDMAVEEKASGAVSTPIEPGESTVSM
SVQVTYYIK
>Mature_248_residues
PQENKNDKSYYVIIALSVVLVLMAATIYAISQNEPEKDAENTISMSGYAEQKVVPDTATMRIGVVIQAATAKEASDENAA
IMSNIVSELKAIGLQDREIQTSYVSVYPIYSYDTTQKITGYAASNSVQITTTNLDNLSQIIDRSTAAGANEIGSISFSVS
DDMQKQLREDLMNEAINDASSKADTLAKSLGVEITGVKTSSISESNGPRVYYEYDMAVEEKASGAVSTPIEPGESTVSMS
VQVTYYIK

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 26868; Mature: 26737

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQENKNDKSYYVIIALSVVLVLMAATIYAISQNEPEKDAENTISMSGYAEQKVVPDTAT
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCE
MRIGVVIQAATAKEASDENAAIMSNIVSELKAIGLQDREIQTSYVSVYPIYSYDTTQKIT
EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCHHEE
GYAASNSVQITTTNLDNLSQIIDRSTAAGANEIGSISFSVSDDMQKQLREDLMNEAINDA
EEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC
SSKADTLAKSLGVEITGVKTSSISESNGPRVYYEYDMAVEEKASGAVSTPIEPGESTVSM
CHHHHHHHHHHCEEEEEEEECCCCCCCCCEEEEEECCEEHHHCCCCCCCCCCCCCCEEEE
SVQVTYYIK
EEEEEEEEC
>Mature Secondary Structure 
PQENKNDKSYYVIIALSVVLVLMAATIYAISQNEPEKDAENTISMSGYAEQKVVPDTAT
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCE
MRIGVVIQAATAKEASDENAAIMSNIVSELKAIGLQDREIQTSYVSVYPIYSYDTTQKIT
EEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCHHEE
GYAASNSVQITTTNLDNLSQIIDRSTAAGANEIGSISFSVSDDMQKQLREDLMNEAINDA
EEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHC
SSKADTLAKSLGVEITGVKTSSISESNGPRVYYEYDMAVEEKASGAVSTPIEPGESTVSM
CHHHHHHHHHHCEEEEEEEECCCCCCCCCEEEEEECCEEHHHCCCCCCCCCCCCCCEEEE
SVQVTYYIK
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748294 [H]