Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227662

Identifier: 21227662

GI number: 21227662

Start: 1859477

End: 1860163

Strand: Direct

Name: 21227662

Synonym: MM_1560

Alternate gene names: NA

Gene position: 1859477-1860163 (Clockwise)

Preceding gene: 21227661

Following gene: 21227663

Centisome position: 45.39

GC content: 41.63

Gene sequence:

>687_bases
ATGAAGGCGTGGGGAAATGTCCGATGTAAATTTCTTAATTCCTTTAAGGCTTCACCTGAAGGTCTCTCTCCTGTTATCGG
CTCCCTTCTCCTTCTGCTGATTACATTTATACTCGTGGCTGCAATTGTTAGCAGTGTAGCCCTCTCTGGCAGTAGAATGA
ATCTCCAGCCTCCTGTTGTAAATATAGATCTTGAATCCTGTGAAGGAGGGCTTTATGGAGTTGGCCATTCAAGCCACTGG
GTCACATTTAAAGAAAATCGGATTGTTCTTATGCATGAGGGAGGAGACTCCCTTTCACCAGACTCTATCTCTATAAAAAT
TTCCGGATATGGAAATTCTTTCCAGGGGAACATTTCTAATGGGACTGGAAAAAGAGCTGAAGGAAATTTAGAGGTTCTTT
ACATGGATCTGAGCCAGGAAAGAAAAAATCAAAAATACTACGTTGCCAATAATAATGCCACTCTTGAAGATGGCTCCTGG
GATATCGGGGAGAGACTTATCCTCTGCGGACAGGACAGCCCAAAAAAGTCCGCTAAATCCAGTGTAGTAGTCAGTGTAAA
TGGGAACGGTAACACCTCTGACAATTACGGTTTCAAAGCAGGTACTGAAATAACCCTGAAAATTATTGACAGAAAAAGCA
GGAATGTCATTTCTGAACAAAAAGCTACTGTCAAATTTGTAGATTGA

Upstream 100 bases:

>100_bases
TCTTTTTACAATTCTCTCTGCTATTTCTTTTTTTAATAATTCTTATTCTTTTTTAGTCAATTAAGTAATTATTTATTCAA
GTTCTTCCTATTATCTACTG

Downstream 100 bases:

>100_bases
TTTGATACGAGAAACAGCATTGCTAATTAATGACATATGTGAAATGATATGGGTGAATGAAAATGCTAAATTCTTTCCGT
TAATTGTCAACATTTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKAWGNVRCKFLNSFKASPEGLSPVIGSLLLLLITFILVAAIVSSVALSGSRMNLQPPVVNIDLESCEGGLYGVGHSSHW
VTFKENRIVLMHEGGDSLSPDSISIKISGYGNSFQGNISNGTGKRAEGNLEVLYMDLSQERKNQKYYVANNNATLEDGSW
DIGERLILCGQDSPKKSAKSSVVVSVNGNGNTSDNYGFKAGTEITLKIIDRKSRNVISEQKATVKFVD

Sequences:

>Translated_228_residues
MKAWGNVRCKFLNSFKASPEGLSPVIGSLLLLLITFILVAAIVSSVALSGSRMNLQPPVVNIDLESCEGGLYGVGHSSHW
VTFKENRIVLMHEGGDSLSPDSISIKISGYGNSFQGNISNGTGKRAEGNLEVLYMDLSQERKNQKYYVANNNATLEDGSW
DIGERLILCGQDSPKKSAKSSVVVSVNGNGNTSDNYGFKAGTEITLKIIDRKSRNVISEQKATVKFVD
>Mature_228_residues
MKAWGNVRCKFLNSFKASPEGLSPVIGSLLLLLITFILVAAIVSSVALSGSRMNLQPPVVNIDLESCEGGLYGVGHSSHW
VTFKENRIVLMHEGGDSLSPDSISIKISGYGNSFQGNISNGTGKRAEGNLEVLYMDLSQERKNQKYYVANNNATLEDGSW
DIGERLILCGQDSPKKSAKSSVVVSVNGNGNTSDNYGFKAGTEITLKIIDRKSRNVISEQKATVKFVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24649; Mature: 24649

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAWGNVRCKFLNSFKASPEGLSPVIGSLLLLLITFILVAAIVSSVALSGSRMNLQPPVV
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
NIDLESCEGGLYGVGHSSHWVTFKENRIVLMHEGGDSLSPDSISIKISGYGNSFQGNISN
EEEHHHCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCCEECCCCC
GTGKRAEGNLEVLYMDLSQERKNQKYYVANNNATLEDGSWDIGERLILCGQDSPKKSAKS
CCCCCCCCCEEEEEEECCHHCCCCEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCC
SVVVSVNGNGNTSDNYGFKAGTEITLKIIDRKSRNVISEQKATVKFVD
EEEEEECCCCCCCCCCCEECCCEEEEEEECCCCCCHHHCCCCEEEEEC
>Mature Secondary Structure
MKAWGNVRCKFLNSFKASPEGLSPVIGSLLLLLITFILVAAIVSSVALSGSRMNLQPPVV
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
NIDLESCEGGLYGVGHSSHWVTFKENRIVLMHEGGDSLSPDSISIKISGYGNSFQGNISN
EEEHHHCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCCEECCCCC
GTGKRAEGNLEVLYMDLSQERKNQKYYVANNNATLEDGSWDIGERLILCGQDSPKKSAKS
CCCCCCCCCEEEEEEECCHHCCCCEEEEECCCCEEECCCCCCCCEEEEECCCCCCCCCCC
SVVVSVNGNGNTSDNYGFKAGTEITLKIIDRKSRNVISEQKATVKFVD
EEEEEECCCCCCCCCCCEECCCEEEEEEECCCCCCHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA