| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227636
Identifier: 21227636
GI number: 21227636
Start: 1832698
End: 1833639
Strand: Direct
Name: 21227636
Synonym: MM_1534
Alternate gene names: NA
Gene position: 1832698-1833639 (Clockwise)
Preceding gene: 21227635
Following gene: 21227637
Centisome position: 44.74
GC content: 42.78
Gene sequence:
>942_bases ATGAAAAAAAAAACCCGACCACTTGAACAAAACGAAAATATCTCCCAGGACAATTCAGGTTACTTTTTTCAGGGCTTTTA TGACCTTAATCTGTCTTCGCCCTGCTTCTCTTTCACTTCGGTGCAGTACATCCCTTGCCTTGATCTCAGCATCTGCCGGG AAACCGGAGTGAAATCAATTATCAAAGCACACAGCAAGGACATGTACCACCTGCTTGAAAATGTTCATTTTGATGGTGAA TACTGCAGGGTGAAGTGTGCAAAAGATGGAGAATGGGAGTTCTGCTGGGATCTGGCAGTCAGGGTCCAGTTTTTTGGGAA AATGCAGGGGGTTGCCCTTTACCCTAAACGTTCGTTTTCAGGGAAGGAAAAGAAGATAGTTTACAGGTCTTTTATTCTGG TTAACCCGTATCAGCTCTGGGATGAATCCCTTGTAAGAAGGTTCTGGAATATTCAGGAGAGAATAGAGTTTCTTGTAGCC AGGATTCTTTTTCACGAATGCATTCATGTTATGATTTCACTTGGAAAGACCTTTCCCTCTTCGTCCGGGAATACGGATAT TTTTCTTGAATTCAGGGAAATGCTGGATATAGCAGAGTCCAAAAAGCTTGTTACTGAAACCAATGAAGTTAAATTCCGTC TCTGGAATCTGGCGCTCTTTGGGGCTTCAGGTTCTGAAAGTGAACAAACATTATTTGAAAGAGTTCAGGAGCTCTACGAG TTCCTTATTAATGAAAAATACAGCAACCAGAAAACAGGACAGGTTTTCAACTCTCCCTTACGCAATTCAAAATTAGCCCG GAAATATGCCTGGATAGCAGCTGTCAAAGCCGGAGGAGACCAGCAGATCAGTAAAAGAGTGTGGCAGGTTGAAGTCCGCA GGCTCAGCATAGCGTTGAGGGCGTTATATGATGAAATTGACTCTCTGCTGAGAGTAAAATAA
Upstream 100 bases:
>100_bases TTTGTTCCACTCCTATTTTTTCATTTTATATTTCCTGTTGATCAATTTTTATATATCCTCAGTGATAATATCTTATAGGG TACGTTGGAGGGAAGATGGC
Downstream 100 bases:
>100_bases ATTTTTTGTTGATGCCAGAAAACAGTGCGTTTTTTTAATGACTTCGGAAGATCCTGAAAATTTATATTGCTCACATCCAG AAGAAATCCTCCGAAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKKKTRPLEQNENISQDNSGYFFQGFYDLNLSSPCFSFTSVQYIPCLDLSICRETGVKSIIKAHSKDMYHLLENVHFDGE YCRVKCAKDGEWEFCWDLAVRVQFFGKMQGVALYPKRSFSGKEKKIVYRSFILVNPYQLWDESLVRRFWNIQERIEFLVA RILFHECIHVMISLGKTFPSSSGNTDIFLEFREMLDIAESKKLVTETNEVKFRLWNLALFGASGSESEQTLFERVQELYE FLINEKYSNQKTGQVFNSPLRNSKLARKYAWIAAVKAGGDQQISKRVWQVEVRRLSIALRALYDEIDSLLRVK
Sequences:
>Translated_313_residues MKKKTRPLEQNENISQDNSGYFFQGFYDLNLSSPCFSFTSVQYIPCLDLSICRETGVKSIIKAHSKDMYHLLENVHFDGE YCRVKCAKDGEWEFCWDLAVRVQFFGKMQGVALYPKRSFSGKEKKIVYRSFILVNPYQLWDESLVRRFWNIQERIEFLVA RILFHECIHVMISLGKTFPSSSGNTDIFLEFREMLDIAESKKLVTETNEVKFRLWNLALFGASGSESEQTLFERVQELYE FLINEKYSNQKTGQVFNSPLRNSKLARKYAWIAAVKAGGDQQISKRVWQVEVRRLSIALRALYDEIDSLLRVK >Mature_313_residues MKKKTRPLEQNENISQDNSGYFFQGFYDLNLSSPCFSFTSVQYIPCLDLSICRETGVKSIIKAHSKDMYHLLENVHFDGE YCRVKCAKDGEWEFCWDLAVRVQFFGKMQGVALYPKRSFSGKEKKIVYRSFILVNPYQLWDESLVRRFWNIQERIEFLVA RILFHECIHVMISLGKTFPSSSGNTDIFLEFREMLDIAESKKLVTETNEVKFRLWNLALFGASGSESEQTLFERVQELYE FLINEKYSNQKTGQVFNSPLRNSKLARKYAWIAAVKAGGDQQISKRVWQVEVRRLSIALRALYDEIDSLLRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36627; Mature: 36627
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTRPLEQNENISQDNSGYFFQGFYDLNLSSPCFSFTSVQYIPCLDLSICRETGVKSI CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH IKAHSKDMYHLLENVHFDGEYCRVKCAKDGEWEFCWDLAVRVQFFGKMQGVALYPKRSFS HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC GKEKKIVYRSFILVNPYQLWDESLVRRFWNIQERIEFLVARILFHECIHVMISLGKTFPS CCHHHEEEEHEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGNTDIFLEFREMLDIAESKKLVTETNEVKFRLWNLALFGASGSESEQTLFERVQELYE CCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH FLINEKYSNQKTGQVFNSPLRNSKLARKYAWIAAVKAGGDQQISKRVWQVEVRRLSIALR HHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHH ALYDEIDSLLRVK HHHHHHHHHHCCC >Mature Secondary Structure MKKKTRPLEQNENISQDNSGYFFQGFYDLNLSSPCFSFTSVQYIPCLDLSICRETGVKSI CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH IKAHSKDMYHLLENVHFDGEYCRVKCAKDGEWEFCWDLAVRVQFFGKMQGVALYPKRSFS HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC GKEKKIVYRSFILVNPYQLWDESLVRRFWNIQERIEFLVARILFHECIHVMISLGKTFPS CCHHHEEEEHEEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGNTDIFLEFREMLDIAESKKLVTETNEVKFRLWNLALFGASGSESEQTLFERVQELYE CCCCCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHH FLINEKYSNQKTGQVFNSPLRNSKLARKYAWIAAVKAGGDQQISKRVWQVEVRRLSIALR HHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHH ALYDEIDSLLRVK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA