| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yieM [C]
Identifier: 21227632
GI number: 21227632
Start: 1827882
End: 1829603
Strand: Reverse
Name: yieM [C]
Synonym: MM_1530
Alternate gene names: 21227632
Gene position: 1829603-1827882 (Counterclockwise)
Preceding gene: 21227633
Following gene: 161485674
Centisome position: 44.66
GC content: 44.02
Gene sequence:
>1722_bases ATGCAGGGCCTGAAAAGCTTCAGAAAACACTTTGAAAATCCTTCCGGATCAGATAAGGCGGTTTTTGACAGAGACTTTAA TCCCGGTACTATACTGAACACAGAGCTGAGGGAATTTCTGGCAACTCCCCGAAAAGTGCCCTACAGGCTCAGGGAAGAGA TTGCAGAGGTCCTCATTCACGAGCTTCTTTCCGGAAAAGACTACGAGATAAAGGACGAAAAACTCTTTATGGGGAAATTC GGAGTTTTTTATCCACTATTTCTTGGCATGAGGAATCAGCAGGTATGGGAAGAAATAAAAATCCTCGCCGGAGAAAACCG TATGGCAGGGATTTTTATTCTGAGAACCCTGCTTGAAGAAATTTTTACTCTCCTTGGAGATTATGAAAAATTAGAAAAAG ATCTTTTGAGAAAACCCCAGAAAGGGCTGGAAAAAGCTCTGAAAACCCTGAAAGAGCTGATTAATGAAACTCAGGCCCTT TGGGAAAGAAACAGGCTGGAAAAGGTAGAGAGCCCGGGAAATTATGAGTGGGAAAAGAATTTGAAAGAATCCCCGGAAGA GAAAAGTGAAGAAGAGAACAAACAGAATATCCAGGAAAGTTTTCTTAATACATCCGAAGACCAGGCAGAGACATATAAAG AAGAGGAACCGGAAGCATCGGAAAGGCTTGCCTTAATGACCAGAGAATTCATGTTCAGTGAAAAAGCTGGCGAGGCTGTA GACACGGTCGTGGAGGAAAAAATAATTGTAAAGCTTGAGGAGCTTATGCCCCTCCTTGAAGACCACCTCGAAATGCTTGA GATCCTGTCCATGCTTTTTCCCGGGAGGGCATGGGACTATTCCTTACAGGCCCTTCACAGGGAATATTTCGAAAATCTCG AGAAATATGCATCTCTTTTCAGAAAAAGCTCTGACCTGCATAAGATCCTTGAACAGGTGGGCAGAATCGAGCTTGAGTAT GGGTCAAAAAAACTAAGATTGTCGCCCCACAGCAAAACTGAGGTTCATTCCATCAACCTGTCAGGTGATATCCAGACCCT GCTTCCGATAGAAACCGTAAAGCTCAAAAACCCCGTGCTGAAGCGCAAGTTCTATGCTGACATGATTGAAGAAAAACTCC TCACATACCAGTTAAGAGGAGAAAACTGGAACTCGGATTTTGCAGGAAAAAAAAGGAAGGGACCTGTTGTAGCCCTTGTG GATACTTCCGCTTCCATGAGAGGAGCCCCTGAACTTCTTGCAAAAGCCGTGGTCCTGGCAATAGCAAGAAAGATGTTAAG AGAAAGCAGGGATGTCAAAGTAATTCTGTTTTCATCAAAATGGCAGACAGTTGAGATCGAACTTACGGACAAAAAACGTA TGGGGAAAGAGTTTCTTGAATTTCTCAAGTATACGTTTGGCGGGGGGACGGACTTCAATACCGCACTCCGGCAGGGGCTA AAGACAATAAAAAAAGAGAAAGCATTTCAGGGGGCAGACCTTCTTTTTCTTACGGACGGGAGTTCGGAACTGTCAGAGAG GCCTCTTATCCGGGAGTGGAATGAAATAAAAATAGAAAAAAAAGCACGCATTTTTTCCCTGATAATAGGGAATTACGATG CAGGCGGTCTGGACCAGGTATCAGATCAGACTTATATCATAAACGACTCCGGGAACTGGCAGGTAGAACAAAGCCCTTCA AGGCTTATAAAAGCGGTCAGCAGACCTGCAAGAATGTTCTGA
Upstream 100 bases:
>100_bases AAATCAGGGCCCTTCTGGAAAAACCGAAGATATTCGACGTGGAAATCGAAGAAATAAAAGTTGCCTGAATGGAAAACTCC TGAAAAAGGAAACAAAGAAT
Downstream 100 bases:
>100_bases CATGCAGATAAAAGGATGCCTTAACTGGAAGGAAAAATTGAGAAAATAGAGTTCCCGCACCCGCAGATTTTATGATCTCA GGGCTTAATGTGAACTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MQGLKSFRKHFENPSGSDKAVFDRDFNPGTILNTELREFLATPRKVPYRLREEIAEVLIHELLSGKDYEIKDEKLFMGKF GVFYPLFLGMRNQQVWEEIKILAGENRMAGIFILRTLLEEIFTLLGDYEKLEKDLLRKPQKGLEKALKTLKELINETQAL WERNRLEKVESPGNYEWEKNLKESPEEKSEEENKQNIQESFLNTSEDQAETYKEEEPEASERLALMTREFMFSEKAGEAV DTVVEEKIIVKLEELMPLLEDHLEMLEILSMLFPGRAWDYSLQALHREYFENLEKYASLFRKSSDLHKILEQVGRIELEY GSKKLRLSPHSKTEVHSINLSGDIQTLLPIETVKLKNPVLKRKFYADMIEEKLLTYQLRGENWNSDFAGKKRKGPVVALV DTSASMRGAPELLAKAVVLAIARKMLRESRDVKVILFSSKWQTVEIELTDKKRMGKEFLEFLKYTFGGGTDFNTALRQGL KTIKKEKAFQGADLLFLTDGSSELSERPLIREWNEIKIEKKARIFSLIIGNYDAGGLDQVSDQTYIINDSGNWQVEQSPS RLIKAVSRPARMF
Sequences:
>Translated_573_residues MQGLKSFRKHFENPSGSDKAVFDRDFNPGTILNTELREFLATPRKVPYRLREEIAEVLIHELLSGKDYEIKDEKLFMGKF GVFYPLFLGMRNQQVWEEIKILAGENRMAGIFILRTLLEEIFTLLGDYEKLEKDLLRKPQKGLEKALKTLKELINETQAL WERNRLEKVESPGNYEWEKNLKESPEEKSEEENKQNIQESFLNTSEDQAETYKEEEPEASERLALMTREFMFSEKAGEAV DTVVEEKIIVKLEELMPLLEDHLEMLEILSMLFPGRAWDYSLQALHREYFENLEKYASLFRKSSDLHKILEQVGRIELEY GSKKLRLSPHSKTEVHSINLSGDIQTLLPIETVKLKNPVLKRKFYADMIEEKLLTYQLRGENWNSDFAGKKRKGPVVALV DTSASMRGAPELLAKAVVLAIARKMLRESRDVKVILFSSKWQTVEIELTDKKRMGKEFLEFLKYTFGGGTDFNTALRQGL KTIKKEKAFQGADLLFLTDGSSELSERPLIREWNEIKIEKKARIFSLIIGNYDAGGLDQVSDQTYIINDSGNWQVEQSPS RLIKAVSRPARMF >Mature_573_residues MQGLKSFRKHFENPSGSDKAVFDRDFNPGTILNTELREFLATPRKVPYRLREEIAEVLIHELLSGKDYEIKDEKLFMGKF GVFYPLFLGMRNQQVWEEIKILAGENRMAGIFILRTLLEEIFTLLGDYEKLEKDLLRKPQKGLEKALKTLKELINETQAL WERNRLEKVESPGNYEWEKNLKESPEEKSEEENKQNIQESFLNTSEDQAETYKEEEPEASERLALMTREFMFSEKAGEAV DTVVEEKIIVKLEELMPLLEDHLEMLEILSMLFPGRAWDYSLQALHREYFENLEKYASLFRKSSDLHKILEQVGRIELEY GSKKLRLSPHSKTEVHSINLSGDIQTLLPIETVKLKNPVLKRKFYADMIEEKLLTYQLRGENWNSDFAGKKRKGPVVALV DTSASMRGAPELLAKAVVLAIARKMLRESRDVKVILFSSKWQTVEIELTDKKRMGKEFLEFLKYTFGGGTDFNTALRQGL KTIKKEKAFQGADLLFLTDGSSELSERPLIREWNEIKIEKKARIFSLIIGNYDAGGLDQVSDQTYIINDSGNWQVEQSPS RLIKAVSRPARMF
Specific function: Unknown
COG id: COG2425
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
Organism=Escherichia coli, GI48994959, Length=292, Percent_Identity=27.3972602739726, Blast_Score=107, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66374; Mature: 66374
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLKSFRKHFENPSGSDKAVFDRDFNPGTILNTELREFLATPRKVPYRLREEIAEVLIH CCHHHHHHHHCCCCCCCCCCEEECCCCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHH ELLSGKDYEIKDEKLFMGKFGVFYPLFLGMRNQQVWEEIKILAGENRMAGIFILRTLLEE HHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH IFTLLGDYEKLEKDLLRKPQKGLEKALKTLKELINETQALWERNRLEKVESPGNYEWEKN HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LKESPEEKSEEENKQNIQESFLNTSEDQAETYKEEEPEASERLALMTREFMFSEKAGEAV HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH DTVVEEKIIVKLEELMPLLEDHLEMLEILSMLFPGRAWDYSLQALHREYFENLEKYASLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKSSDLHKILEQVGRIELEYGSKKLRLSPHSKTEVHSINLSGDIQTLLPIETVKLKNPVL HCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCCEEEEECCCCCHHHCCHHHHHHCCHHH KRKFYADMIEEKLLTYQLRGENWNSDFAGKKRKGPVVALVDTSASMRGAPELLAKAVVLA HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH IARKMLRESRDVKVILFSSKWQTVEIELTDKKRMGKEFLEFLKYTFGGGTDFNTALRQGL HHHHHHHCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KTIKKEKAFQGADLLFLTDGSSELSERPLIREWNEIKIEKKARIFSLIIGNYDAGGLDQV HHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SDQTYIINDSGNWQVEQSPSRLIKAVSRPARMF CCCEEEEECCCCEEEECCHHHHHHHHHCCCCCC >Mature Secondary Structure MQGLKSFRKHFENPSGSDKAVFDRDFNPGTILNTELREFLATPRKVPYRLREEIAEVLIH CCHHHHHHHHCCCCCCCCCCEEECCCCCCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHH ELLSGKDYEIKDEKLFMGKFGVFYPLFLGMRNQQVWEEIKILAGENRMAGIFILRTLLEE HHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH IFTLLGDYEKLEKDLLRKPQKGLEKALKTLKELINETQALWERNRLEKVESPGNYEWEKN HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH LKESPEEKSEEENKQNIQESFLNTSEDQAETYKEEEPEASERLALMTREFMFSEKAGEAV HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH DTVVEEKIIVKLEELMPLLEDHLEMLEILSMLFPGRAWDYSLQALHREYFENLEKYASLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKSSDLHKILEQVGRIELEYGSKKLRLSPHSKTEVHSINLSGDIQTLLPIETVKLKNPVL HCCHHHHHHHHHHCCEEEECCCCEEEECCCCCCCEEEEECCCCCHHHCCHHHHHHCCHHH KRKFYADMIEEKLLTYQLRGENWNSDFAGKKRKGPVVALVDTSASMRGAPELLAKAVVLA HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH IARKMLRESRDVKVILFSSKWQTVEIELTDKKRMGKEFLEFLKYTFGGGTDFNTALRQGL HHHHHHHCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KTIKKEKAFQGADLLFLTDGSSELSERPLIREWNEIKIEKKARIFSLIIGNYDAGGLDQV HHHHHHHHCCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SDQTYIINDSGNWQVEQSPSRLIKAVSRPARMF CCCEEEEECCCCEEEECCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]