The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227627

Identifier: 21227627

GI number: 21227627

Start: 1818033

End: 1819229

Strand: Reverse

Name: 21227627

Synonym: MM_1525

Alternate gene names: NA

Gene position: 1819229-1818033 (Counterclockwise)

Preceding gene: 21227628

Following gene: 21227626

Centisome position: 44.41

GC content: 46.95

Gene sequence:

>1197_bases
ATGTATCTAACAAAAGAAGAAGAACAAATCCTGAACGGAGAAGCCGGAGAAACTCTCAGGCAGGCAATTCAGATCCTTGT
AGCTCTTGGAGACATCTACGGAGCGGACAGGTTGATCCCTATCAAAAGCGCCCAGATTGCAGGTGTTTCCTATAAGACAA
TAGGAGATGCCGGGCTTGAGTGGATTTCCGACCTTGAGGGACAGGTAAAGGTTCCTGCAATCCTTAACCCTGCAGGAATG
GATCTTGAAGACTGGGAGAGGCTGAGAATCTCTCCAGAATTTGCAGAAAAACAGAAAGAAATTGTTCAGGCTTATAAAAA
ACTCGGGATTCGCTGCGAATGTACCTGCACTCCCTATACTCTTGAAGGATTTTCAGTTAGCTATGGGGACCACCTTGCAT
GGAGTGAGTCCTCAGCCATTTCTTATGCAAACTCCGTGATCGGAGCCAGGACAAATAGAGAGGGAGGCCCGTCAGCCCTT
TCGGCAGCACTTCTCGGGAAAACTGCAAACTACGGGTTCCACCTGGATAAAAACCGCGTGCCTGAGGTCTCTGTCAGTGT
GGAGTGCTCACTTAAAGAATCGGATTACGGAGCACTTGGGTATGTTGCAGGGAAACTCATTGGGAACAGAGTGCCTATTT
TTCAATTAAGGAGTAAACCGGAAAAGGATGAATTGAAATCCCTTGGGGCTGCAATGGCGGCTTCAGGAGCAGTGGCACTT
TACCATGTAAAAGGAGTAACACCCGAAGCCTGCAGAATGGATTTTGAAGAGCCTGAGGAAAAAATAATAATTGAGAGAAG
CCAGCTGGATGAAGTTTATGAGAGCAAAGGCAAAGAACCCGAACTGATTACTATTGGATGCCCTCACTGCTCTGCGGCCG
AACTTAAGAAGGCGGCTGAATTATTGAAAGGAAAAACAGTCTCAAAGGAGACCTGGATTTTTACCTCAAGGGAACTTGCA
GAAAGATATCCTGAGTATATAAGGACCATTGAAGAAAGCGGAGCTAAGGTTGTATGCGATACCTGCATGGTAGTCTCCCC
TGCAACTAACAGTTATTCCTGCGTGATGGTAAATTCGGGAAAAGCCTTTGCTTATGTGCCGGGGATGTGCGGAGCTCAGA
GCGTATACGGGAATATGGAAGCCTGTATCAATAAGGCGACTGGCGGGAAAGAGAGAAAGGCAGGTGATTCCCATTAA

Upstream 100 bases:

>100_bases
TTTATAACAGCCATATTTACAACGGCCGCATATGCTGCGAAAAGCTGTACCGGTATTCTGCACCTGCATTTATTACCTCG
CAGTTAAAGAGTGAATTTTC

Downstream 100 bases:

>100_bases
ATTCAAAGGCAGAACAATTTCAAGGGGATGCGCAGAAGGGGAGGTTTTGATTTCAAGGGACCCGATCTCCTTTCTGGGAA
GTGTGGATCCCAGAACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MYLTKEEEQILNGEAGETLRQAIQILVALGDIYGADRLIPIKSAQIAGVSYKTIGDAGLEWISDLEGQVKVPAILNPAGM
DLEDWERLRISPEFAEKQKEIVQAYKKLGIRCECTCTPYTLEGFSVSYGDHLAWSESSAISYANSVIGARTNREGGPSAL
SAALLGKTANYGFHLDKNRVPEVSVSVECSLKESDYGALGYVAGKLIGNRVPIFQLRSKPEKDELKSLGAAMAASGAVAL
YHVKGVTPEACRMDFEEPEEKIIIERSQLDEVYESKGKEPELITIGCPHCSAAELKKAAELLKGKTVSKETWIFTSRELA
ERYPEYIRTIEESGAKVVCDTCMVVSPATNSYSCVMVNSGKAFAYVPGMCGAQSVYGNMEACINKATGGKERKAGDSH

Sequences:

>Translated_398_residues
MYLTKEEEQILNGEAGETLRQAIQILVALGDIYGADRLIPIKSAQIAGVSYKTIGDAGLEWISDLEGQVKVPAILNPAGM
DLEDWERLRISPEFAEKQKEIVQAYKKLGIRCECTCTPYTLEGFSVSYGDHLAWSESSAISYANSVIGARTNREGGPSAL
SAALLGKTANYGFHLDKNRVPEVSVSVECSLKESDYGALGYVAGKLIGNRVPIFQLRSKPEKDELKSLGAAMAASGAVAL
YHVKGVTPEACRMDFEEPEEKIIIERSQLDEVYESKGKEPELITIGCPHCSAAELKKAAELLKGKTVSKETWIFTSRELA
ERYPEYIRTIEESGAKVVCDTCMVVSPATNSYSCVMVNSGKAFAYVPGMCGAQSVYGNMEACINKATGGKERKAGDSH
>Mature_398_residues
MYLTKEEEQILNGEAGETLRQAIQILVALGDIYGADRLIPIKSAQIAGVSYKTIGDAGLEWISDLEGQVKVPAILNPAGM
DLEDWERLRISPEFAEKQKEIVQAYKKLGIRCECTCTPYTLEGFSVSYGDHLAWSESSAISYANSVIGARTNREGGPSAL
SAALLGKTANYGFHLDKNRVPEVSVSVECSLKESDYGALGYVAGKLIGNRVPIFQLRSKPEKDELKSLGAAMAASGAVAL
YHVKGVTPEACRMDFEEPEEKIIIERSQLDEVYESKGKEPELITIGCPHCSAAELKKAAELLKGKTVSKETWIFTSRELA
ERYPEYIRTIEESGAKVVCDTCMVVSPATNSYSCVMVNSGKAFAYVPGMCGAQSVYGNMEACINKATGGKERKAGDSH

Specific function: Unknown

COG id: COG1679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1421 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007506 [H]

Pfam domain/function: PF04412 DUF521 [H]

EC number: NA

Molecular weight: Translated: 43196; Mature: 43196

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLTKEEEQILNGEAGETLRQAIQILVALGDIYGADRLIPIKSAQIAGVSYKTIGDAGLE
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCEEECCCHHHHH
WISDLEGQVKVPAILNPAGMDLEDWERLRISPEFAEKQKEIVQAYKKLGIRCECTCTPYT
HHHCCCCCEECCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCEE
LEGFSVSYGDHLAWSESSAISYANSVIGARTNREGGPSALSAALLGKTANYGFHLDKNRV
ECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCC
PEVSVSVECSLKESDYGALGYVAGKLIGNRVPIFQLRSKPEKDELKSLGAAMAASGAVAL
CCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEE
YHVKGVTPEACRMDFEEPEEKIIIERSQLDEVYESKGKEPELITIGCPHCSAAELKKAAE
EEECCCCHHHHCCCCCCCCHHEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
LLKGKTVSKETWIFTSRELAERYPEYIRTIEESGAKVVCDTCMVVSPATNSYSCVMVNSG
HHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEECC
KAFAYVPGMCGAQSVYGNMEACINKATGGKERKAGDSH
CEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYLTKEEEQILNGEAGETLRQAIQILVALGDIYGADRLIPIKSAQIAGVSYKTIGDAGLE
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCEEECCCHHHHH
WISDLEGQVKVPAILNPAGMDLEDWERLRISPEFAEKQKEIVQAYKKLGIRCECTCTPYT
HHHCCCCCEECCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCEE
LEGFSVSYGDHLAWSESSAISYANSVIGARTNREGGPSALSAALLGKTANYGFHLDKNRV
ECCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCC
PEVSVSVECSLKESDYGALGYVAGKLIGNRVPIFQLRSKPEKDELKSLGAAMAASGAVAL
CCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEE
YHVKGVTPEACRMDFEEPEEKIIIERSQLDEVYESKGKEPELITIGCPHCSAAELKKAAE
EEECCCCHHHHCCCCCCCCHHEEEEHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
LLKGKTVSKETWIFTSRELAERYPEYIRTIEESGAKVVCDTCMVVSPATNSYSCVMVNSG
HHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEECC
KAFAYVPGMCGAQSVYGNMEACINKATGGKERKAGDSH
CEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]