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The map label for this gene is yggR [C]

Identifier: 21227618

GI number: 21227618

Start: 1806262

End: 1807938

Strand: Reverse

Name: yggR [C]

Synonym: MM_1516

Alternate gene names: 21227618

Gene position: 1807938-1806262 (Counterclockwise)

Preceding gene: 21227619

Following gene: 21227617

Centisome position: 44.14

GC content: 43.53

Gene sequence:

>1677_bases
ATGGATGAAGTAACAGAAATCTCGGAAAAGAGAAGTTTTATTTCGGGGTTATTCGGGAAAAAAGGCGATAGTAACTCCAT
CTCGGATATATTGAACAGGGCTAAAACTTATTTTGATAAGCCTTTAAGAAGCATGCCTGCGTACGACCAGGAAAAAGACG
GACCTCTTATAAATTTTGAAGTTCCTGAAGGCTTGAAGGAAATTGAGAGGTACTGGCTCCAGGAACCCTATGCTCTGGTA
TCGATCCTGGAAGACCGCAGGACAAGGTACTACAGGCTGATAGAACCCGCCCTGACAAAGTTCGAAAAAGAGCTGCTGGA
GAGGCTCTACGAGGATTTTCAGGACATTCTGATTTTGAATCCCACAACCTCAAAGATAGAAAAAGACGCACTACTTGTAG
ATAAGACACTTTTACTTCTTGAACGCTACAAAGCTGAGATTTCGGCCGCAACAATTCACAAAATAATTTATTATCTTAAA
AGAAACCTTCTCGGTTATGAAAAAATCAATCCTCTTCTTTATGATCCTTATATTGAAGACATATCGTGTGACGGTGTAGG
AGTTCCTCTATATATTTATCATATCAGATATCTGAATATTGAAAGTAATATTTCTTTTGGAGAAGAAGAGCTTGACGCGC
TTGTAATCAAGATGTGCCAGCTTAATAATAAGCACATTTCTGTCAGCCAACCGATTGTGGATGCAACAATTCAGGATGGG
TCAAGGCTTCAGGCTATGCTGGGGAGAGAAATTACTCCGCGCGGCAGTTCTTTTACTATCCGTAAGTTCAGAAAAGACCC
GATAACACCCATCGACCTTCTCGGCTTTAAGACGTGCGATATGGAGATGCTTGTATATCTCTGGCTTGTTATTGAAAACG
GTTACAATATGCTTTTTGCTGGCGGGACGGCTTCAGGAAAGACCTCAATGCTCAACGCAACATCCCTTTTCATGCCTTCA
ACAGCCAAAATAGTCTCCATAGAAGACACAAGGGAACTCCTTCTCTACCACAACAACTGGGTATCGGGCATTGCAAGAGA
GAGTTTTTCAGCAGATTCTACTGGGAAAGTTTCCATGTACGACCTTCTGAGAGCTGCCCTGAGACAGCGCCCAGATTTTA
TAATTGTGGGTGAAGTGAGAGGTGAAGAAGCCCGTACCCTTTTCCAGGCAATGTCAACAGGACATGCTACAAGCTCCACA
ATGCACGCAGGAGATGTGCAGACCGTTATAAACAGACTCACACACGAACCCATAAACGTGCCTCATATTATGCTGCAATC
TCTTGACGTTCTTTGTATCCAGGAGCAGGTGTACATAGATGAAAAAAGAGTCAGGAGGACAAGGAGCCTCGTTGAAGTCC
TTAATGTTGACCCTGAGACAGGAGACCTTGGCATAAACGAGATTTTCAACTGGTATCCTTCTGAAGACGGCTTCCTGAAA
GTTGGAGACTCCCACATCATGCAGGAGATAATGCATGTCAGAGGATGGGATTCGGGCCAGTTGAGGGGTGAGATGGAAAA
CAGAAGAAAGATCCTCACCTACATGTATGAGAAGAATATGAGGAGCTACATCCAGGTATCCCTTGTAGTGCAGGCGTATC
AGAGTTATCCGAAAATGGTCATGGAAGCCATAGAAAACAACATCCTGCAGGGAATGATACAGGATATGGTCGCTTGA

Upstream 100 bases:

>100_bases
CTACAGAAGATAATAATTAATACATTTAGTTGCCAAGATCGAAAGATTTTATAAGAAGTTGCCATCTATATAGCGTAAGA
AGAAATCTGAAGGCGAGAGT

Downstream 100 bases:

>100_bases
GAGAGGGAGCATGACTTACACTTCTGTGGACGAACTGGCATACAGAGCTTTTGGAAATTTCTTTTATAAAAATAAGGAGA
GCTTCCAGGAGCTCAAAGTA

Product: Type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MDEVTEISEKRSFISGLFGKKGDSNSISDILNRAKTYFDKPLRSMPAYDQEKDGPLINFEVPEGLKEIERYWLQEPYALV
SILEDRRTRYYRLIEPALTKFEKELLERLYEDFQDILILNPTTSKIEKDALLVDKTLLLLERYKAEISAATIHKIIYYLK
RNLLGYEKINPLLYDPYIEDISCDGVGVPLYIYHIRYLNIESNISFGEEELDALVIKMCQLNNKHISVSQPIVDATIQDG
SRLQAMLGREITPRGSSFTIRKFRKDPITPIDLLGFKTCDMEMLVYLWLVIENGYNMLFAGGTASGKTSMLNATSLFMPS
TAKIVSIEDTRELLLYHNNWVSGIARESFSADSTGKVSMYDLLRAALRQRPDFIIVGEVRGEEARTLFQAMSTGHATSST
MHAGDVQTVINRLTHEPINVPHIMLQSLDVLCIQEQVYIDEKRVRRTRSLVEVLNVDPETGDLGINEIFNWYPSEDGFLK
VGDSHIMQEIMHVRGWDSGQLRGEMENRRKILTYMYEKNMRSYIQVSLVVQAYQSYPKMVMEAIENNILQGMIQDMVA

Sequences:

>Translated_558_residues
MDEVTEISEKRSFISGLFGKKGDSNSISDILNRAKTYFDKPLRSMPAYDQEKDGPLINFEVPEGLKEIERYWLQEPYALV
SILEDRRTRYYRLIEPALTKFEKELLERLYEDFQDILILNPTTSKIEKDALLVDKTLLLLERYKAEISAATIHKIIYYLK
RNLLGYEKINPLLYDPYIEDISCDGVGVPLYIYHIRYLNIESNISFGEEELDALVIKMCQLNNKHISVSQPIVDATIQDG
SRLQAMLGREITPRGSSFTIRKFRKDPITPIDLLGFKTCDMEMLVYLWLVIENGYNMLFAGGTASGKTSMLNATSLFMPS
TAKIVSIEDTRELLLYHNNWVSGIARESFSADSTGKVSMYDLLRAALRQRPDFIIVGEVRGEEARTLFQAMSTGHATSST
MHAGDVQTVINRLTHEPINVPHIMLQSLDVLCIQEQVYIDEKRVRRTRSLVEVLNVDPETGDLGINEIFNWYPSEDGFLK
VGDSHIMQEIMHVRGWDSGQLRGEMENRRKILTYMYEKNMRSYIQVSLVVQAYQSYPKMVMEAIENNILQGMIQDMVA
>Mature_558_residues
MDEVTEISEKRSFISGLFGKKGDSNSISDILNRAKTYFDKPLRSMPAYDQEKDGPLINFEVPEGLKEIERYWLQEPYALV
SILEDRRTRYYRLIEPALTKFEKELLERLYEDFQDILILNPTTSKIEKDALLVDKTLLLLERYKAEISAATIHKIIYYLK
RNLLGYEKINPLLYDPYIEDISCDGVGVPLYIYHIRYLNIESNISFGEEELDALVIKMCQLNNKHISVSQPIVDATIQDG
SRLQAMLGREITPRGSSFTIRKFRKDPITPIDLLGFKTCDMEMLVYLWLVIENGYNMLFAGGTASGKTSMLNATSLFMPS
TAKIVSIEDTRELLLYHNNWVSGIARESFSADSTGKVSMYDLLRAALRQRPDFIIVGEVRGEEARTLFQAMSTGHATSST
MHAGDVQTVINRLTHEPINVPHIMLQSLDVLCIQEQVYIDEKRVRRTRSLVEVLNVDPETGDLGINEIFNWYPSEDGFLK
VGDSHIMQEIMHVRGWDSGQLRGEMENRRKILTYMYEKNMRSYIQVSLVVQAYQSYPKMVMEAIENNILQGMIQDMVA

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 64097; Mature: 64097

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVTEISEKRSFISGLFGKKGDSNSISDILNRAKTYFDKPLRSMPAYDQEKDGPLINFE
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VPEGLKEIERYWLQEPYALVSILEDRRTRYYRLIEPALTKFEKELLERLYEDFQDILILN
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC
PTTSKIEKDALLVDKTLLLLERYKAEISAATIHKIIYYLKRNLLGYEKINPLLYDPYIED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCC
ISCDGVGVPLYIYHIRYLNIESNISFGEEELDALVIKMCQLNNKHISVSQPIVDATIQDG
CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCC
SRLQAMLGREITPRGSSFTIRKFRKDPITPIDLLGFKTCDMEMLVYLWLVIENGYNMLFA
HHHHHHHCCCCCCCCCCEEHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEE
GGTASGKTSMLNATSLFMPSTAKIVSIEDTRELLLYHNNWVSGIARESFSADSTGKVSMY
CCCCCCCCCEEEHHHEECCCCCEEEEECCCHHHHEEECCHHHHHHHHCCCCCCCCCCHHH
DLLRAALRQRPDFIIVGEVRGEEARTLFQAMSTGHATSSTMHAGDVQTVINRLTHEPINV
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PHIMLQSLDVLCIQEQVYIDEKRVRRTRSLVEVLNVDPETGDLGINEIFNWYPSEDGFLK
HHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEE
VGDSHIMQEIMHVRGWDSGQLRGEMENRRKILTYMYEKNMRSYIQVSLVVQAYQSYPKMV
ECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEAIENNILQGMIQDMVA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEVTEISEKRSFISGLFGKKGDSNSISDILNRAKTYFDKPLRSMPAYDQEKDGPLINFE
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
VPEGLKEIERYWLQEPYALVSILEDRRTRYYRLIEPALTKFEKELLERLYEDFQDILILN
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC
PTTSKIEKDALLVDKTLLLLERYKAEISAATIHKIIYYLKRNLLGYEKINPLLYDPYIED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCC
ISCDGVGVPLYIYHIRYLNIESNISFGEEELDALVIKMCQLNNKHISVSQPIVDATIQDG
CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCC
SRLQAMLGREITPRGSSFTIRKFRKDPITPIDLLGFKTCDMEMLVYLWLVIENGYNMLFA
HHHHHHHCCCCCCCCCCEEHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEE
GGTASGKTSMLNATSLFMPSTAKIVSIEDTRELLLYHNNWVSGIARESFSADSTGKVSMY
CCCCCCCCCEEEHHHEECCCCCEEEEECCCHHHHEEECCHHHHHHHHCCCCCCCCCCHHH
DLLRAALRQRPDFIIVGEVRGEEARTLFQAMSTGHATSSTMHAGDVQTVINRLTHEPINV
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PHIMLQSLDVLCIQEQVYIDEKRVRRTRSLVEVLNVDPETGDLGINEIFNWYPSEDGFLK
HHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEE
VGDSHIMQEIMHVRGWDSGQLRGEMENRRKILTYMYEKNMRSYIQVSLVVQAYQSYPKMV
ECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEAIENNILQGMIQDMVA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]