| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227594
Identifier: 21227594
GI number: 21227594
Start: 1779206
End: 1780117
Strand: Direct
Name: 21227594
Synonym: MM_1492
Alternate gene names: NA
Gene position: 1779206-1780117 (Clockwise)
Preceding gene: 21227588
Following gene: 21227596
Centisome position: 43.43
GC content: 38.82
Gene sequence:
>912_bases GTGGATTCTCTTCAGAAAACTACAATGATAGATTTGCTTTTAAGGTCGGATAAAAGAAGAAAAATTTTGCTTTTTCTTAA GGAAGGACCAAAAAATATTGAGGAAATTACAGCGCTTCTTGGCTCTTCCTGTACTGCGGTTCTTCCTCAGATGAAAAAGC TAATCGAAAAGGGACTGGTCAGGCAGGAAAATAAAATTTACAGGCTTTCAACAGTCGGGATGATCGTTACTGAGAAGCTG GTTCCGCTTCTGGGAACTATTGAGGTCTTTGAAAATAACCTTGAATACTGGGCACAGAAAGACCTCACAGGAATCCCTGC TTTTTTGCGTTTGAAACTCGAGATGCTCTCCCAATATGAGGTAATCGAACCCCAGCTTAACAGGATGTTTGAGCCCCCAG AAGAATTTATAAATTCCCTCAAAAAATCCACGGAAATAATGTATTTTTCTTCTTTTTTTCAGCCCTGTTTCTCAGGTTTT GATCAGGATTTTTTAAAGAAAAGGACAGATTCTACTTTTATTTTTACAAAAAACTTTTTTGAACGGATCTCCAGCCCCCA TTCTGAAGAATATGATGAACTGTTGCTCCCTGAGAGGGCGAATCTCTATGTATATGACGGCATATCTTCCCTGGTTTCGC TTACCGTGACCGAGAGGTTTATGGCGTTAATGCTTCTCAATAAAAAAGGAAAGCTCGATCAGAACCTTCTAATAAGTTCC GAAAGTGAGGCAATCGAGTGGGGTAAAGAACTTTTTATGTACTACAGAGAGATTTCTAAAAAGATTTATGGAGACAAAGC CGATCGCCTCCTCTCTGAAAAAATTATTCCCCCTGGAAAAAAATCAGGATATGGGACGGGTTCTGATCTGTTACAAATCT CCTGTTTAAGAAAAACGAAGTATAAAATGTAA
Upstream 100 bases:
>100_bases ACTGTTTTTATGGATAATCTGAGACAAGTCTGATAGCTGTGTCTGATAGCTGTATATCTGTAACAGCTTATAATTCACTG GAGTATGGTGGTGGGTAGTT
Downstream 100 bases:
>100_bases ATGAAGTAATTAACGTAACAATAATACATAATGTAACAATAATACATAATGTAACAATAATACATAATGTAACAATAATA CATAATGTAACAATAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MDSLQKTTMIDLLLRSDKRRKILLFLKEGPKNIEEITALLGSSCTAVLPQMKKLIEKGLVRQENKIYRLSTVGMIVTEKL VPLLGTIEVFENNLEYWAQKDLTGIPAFLRLKLEMLSQYEVIEPQLNRMFEPPEEFINSLKKSTEIMYFSSFFQPCFSGF DQDFLKKRTDSTFIFTKNFFERISSPHSEEYDELLLPERANLYVYDGISSLVSLTVTERFMALMLLNKKGKLDQNLLISS ESEAIEWGKELFMYYREISKKIYGDKADRLLSEKIIPPGKKSGYGTGSDLLQISCLRKTKYKM
Sequences:
>Translated_303_residues MDSLQKTTMIDLLLRSDKRRKILLFLKEGPKNIEEITALLGSSCTAVLPQMKKLIEKGLVRQENKIYRLSTVGMIVTEKL VPLLGTIEVFENNLEYWAQKDLTGIPAFLRLKLEMLSQYEVIEPQLNRMFEPPEEFINSLKKSTEIMYFSSFFQPCFSGF DQDFLKKRTDSTFIFTKNFFERISSPHSEEYDELLLPERANLYVYDGISSLVSLTVTERFMALMLLNKKGKLDQNLLISS ESEAIEWGKELFMYYREISKKIYGDKADRLLSEKIIPPGKKSGYGTGSDLLQISCLRKTKYKM >Mature_303_residues MDSLQKTTMIDLLLRSDKRRKILLFLKEGPKNIEEITALLGSSCTAVLPQMKKLIEKGLVRQENKIYRLSTVGMIVTEKL VPLLGTIEVFENNLEYWAQKDLTGIPAFLRLKLEMLSQYEVIEPQLNRMFEPPEEFINSLKKSTEIMYFSSFFQPCFSGF DQDFLKKRTDSTFIFTKNFFERISSPHSEEYDELLLPERANLYVYDGISSLVSLTVTERFMALMLLNKKGKLDQNLLISS ESEAIEWGKELFMYYREISKKIYGDKADRLLSEKIIPPGKKSGYGTGSDLLQISCLRKTKYKM
Specific function: Unknown
COG id: COG4742
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35125; Mature: 35125
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLQKTTMIDLLLRSDKRRKILLFLKEGPKNIEEITALLGSSCTAVLPQMKKLIEKGLV CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH RQENKIYRLSTVGMIVTEKLVPLLGTIEVFENNLEYWAQKDLTGIPAFLRLKLEMLSQYE HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHH VIEPQLNRMFEPPEEFINSLKKSTEIMYFSSFFQPCFSGFDQDFLKKRTDSTFIFTKNFF HHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEHHHH ERISSPHSEEYDELLLPERANLYVYDGISSLVSLTVTERFMALMLLNKKGKLDQNLLISS HHHCCCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC ESEAIEWGKELFMYYREISKKIYGDKADRLLSEKIIPPGKKSGYGTGSDLLQISCLRKTK CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YKM CCC >Mature Secondary Structure MDSLQKTTMIDLLLRSDKRRKILLFLKEGPKNIEEITALLGSSCTAVLPQMKKLIEKGLV CCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH RQENKIYRLSTVGMIVTEKLVPLLGTIEVFENNLEYWAQKDLTGIPAFLRLKLEMLSQYE HCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHH VIEPQLNRMFEPPEEFINSLKKSTEIMYFSSFFQPCFSGFDQDFLKKRTDSTFIFTKNFF HHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEHHHH ERISSPHSEEYDELLLPERANLYVYDGISSLVSLTVTERFMALMLLNKKGKLDQNLLISS HHHCCCCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC ESEAIEWGKELFMYYREISKKIYGDKADRLLSEKIIPPGKKSGYGTGSDLLQISCLRKTK CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH YKM CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA