| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227586
Identifier: 21227586
GI number: 21227586
Start: 1767822
End: 1768619
Strand: Reverse
Name: 21227586
Synonym: MM_1484
Alternate gene names: NA
Gene position: 1768619-1767822 (Counterclockwise)
Preceding gene: 21227589
Following gene: 21227585
Centisome position: 43.18
GC content: 41.1
Gene sequence:
>798_bases ATGAACCCAAACTTGCTTGATTTGATCCTGTTTTCAGAGAAAAGAAAGGCTTTTCTCATGCTCCTGAGAGAGGGACCGAA GAATACCCAGGAGATCCTTGACAGGCTTAAGGTTCCAAGAACAGCTCTTCTTCCCCAGATAAAAAAGCTTAAAGAGCAGA ACCTGGTAATTCACGAAGAAGGAGTCTATCGCCTCAGCCTGATAGGAGAGATCATTATAGAAAAGATGCAGCCTCTTCTC GATACTCTGGAAGTTTTTGAAAAACAGGAAGAGTTCTGGACAGACAGGAAACTCACTCCTATCCCCCCTCATCTTATTAA ACGGATCAGTGAACTTGGGAATTACCGCCTTATAGAGCCTGACCTGAGCCATACTTTTGACCTTAACCCTGAATTTGTGA AAAATGTCTCTAACTCAAATCATATCCTTATGTTTTTCTCCTATTTTCATCCTCAATTCCCTTCCTTCTTCCTTGATCTT GCCAGAAGAGGCACTGAAATTTCCCTTGTCCTGAGTGAGTCCGTATACGCCAGGCTCGAAGAGGATTTCAAAAAAGAAGA AAAGGAACTCCTCAAAATGGAGAATACAGGTCTCTTTATTCTGGACGAAAAGGAAGTGGAAATCCCTGCAGTTGTTGTAT CTTCCGATAAAATAATGCTTATGGGGCTGTTTAATGAAAGTGGAAGGTTTGACAGGCAGTATATAATCAGTTTTGAAGCA GGGGCAATAGAATGGGGAAAAGAGCTGTTCGAATACTTCAGGGATATGAGCAGGGAAATTAAAAATGAAGAAAAATAA
Upstream 100 bases:
>100_bases TAATTTCGACATCTTTATCATCAATCTGGTATTCATTAACGCTATAGAGAACCAAAACCGGAAAAAAAACCTCTCTTCTA TTTCCGGGCGGCGATAATAA
Downstream 100 bases:
>100_bases GGGTTTTTTGAGCCTGCTGTCAGAACCTCAAATTAAAGCTCTAAAGTCACGAGTATCCTGCTTAATTTATCATGAACCTC AAATTAAAGCTATTTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA GAIEWGKELFEYFRDMSREIKNEEK
Sequences:
>Translated_265_residues MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA GAIEWGKELFEYFRDMSREIKNEEK >Mature_265_residues MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEEGVYRLSLIGEIIIEKMQPLL DTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEPDLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDL ARRGTEISLVLSESVYARLEEDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA GAIEWGKELFEYFRDMSREIKNEEK
Specific function: Unknown
COG id: COG4742
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31259; Mature: 31259
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEE CCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC GVYRLSLIGEIIIEKMQPLLDTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECC DLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDLARRGTEISLVLSESVYARLE CCCCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHH EDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECC GAIEWGKELFEYFRDMSREIKNEEK CHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPNLLDLILFSEKRKAFLMLLREGPKNTQEILDRLKVPRTALLPQIKKLKEQNLVIHEE CCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC GVYRLSLIGEIIIEKMQPLLDTLEVFEKQEEFWTDRKLTPIPPHLIKRISELGNYRLIEP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEECC DLSHTFDLNPEFVKNVSNSNHILMFFSYFHPQFPSFFLDLARRGTEISLVLSESVYARLE CCCCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHH EDFKKEEKELLKMENTGLFILDEKEVEIPAVVVSSDKIMLMGLFNESGRFDRQYIISFEA HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEECC GAIEWGKELFEYFRDMSREIKNEEK CHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA