| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227562
Identifier: 21227562
GI number: 21227562
Start: 1740462
End: 1740698
Strand: Direct
Name: 21227562
Synonym: MM_1460
Alternate gene names: NA
Gene position: 1740462-1740698 (Clockwise)
Preceding gene: 21227561
Following gene: 21227563
Centisome position: 42.49
GC content: 35.86
Gene sequence:
>237_bases ATGAGCGAGATAAAAATCTGTGAAGTTAGGTGCCCAAACTGTAGAAAGTGGTTCAGCTCAAAAATTGCTCAATTTGAAGA TGCAGAAACATTCAGGCGTGCTATAACGTACAAAAATGCAGAACCATGCCCGTACTGTAAGACAATGATTTCTCACGACA AAGAAATCATGAGATTCTTAGAAAAAGATAATACTGGTAAAGTTATCCGAGAAACCAGGTGTATATATAATTTCTAA
Upstream 100 bases:
>100_bases TTTTAGTGTTATAATTAGACTAATCTTTGCCACCTTACTTTATATATAAGTTTGATAATTCTTTATACAATGTAAAATTA AGTGTAAAGACGATGGGAAA
Downstream 100 bases:
>100_bases TCTTTATAAATATCCTCTCAAAAAAATGGACCTTTAAATGATAAATTTTCTTTAATTTTAACTGGATTGCCTGGCAAACC CTTTATCATCTTCAGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSEIKICEVRCPNCRKWFSSKIAQFEDAETFRRAITYKNAEPCPYCKTMISHDKEIMRFLEKDNTGKVIRETRCIYNF
Sequences:
>Translated_78_residues MSEIKICEVRCPNCRKWFSSKIAQFEDAETFRRAITYKNAEPCPYCKTMISHDKEIMRFLEKDNTGKVIRETRCIYNF >Mature_77_residues SEIKICEVRCPNCRKWFSSKIAQFEDAETFRRAITYKNAEPCPYCKTMISHDKEIMRFLEKDNTGKVIRETRCIYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9364; Mature: 9233
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIKICEVRCPNCRKWFSSKIAQFEDAETFRRAITYKNAEPCPYCKTMISHDKEIMRFL CCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH EKDNTGKVIRETRCIYNF HCCCCCHHHHHHHHHCCC >Mature Secondary Structure SEIKICEVRCPNCRKWFSSKIAQFEDAETFRRAITYKNAEPCPYCKTMISHDKEIMRFL CCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH EKDNTGKVIRETRCIYNF HCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA