| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mtmP [C]
Identifier: 21227537
GI number: 21227537
Start: 1715594
End: 1717000
Strand: Reverse
Name: mtmP [C]
Synonym: MM_1435
Alternate gene names: 21227537
Gene position: 1717000-1715594 (Counterclockwise)
Preceding gene: 21227538
Following gene: 21227536
Centisome position: 41.92
GC content: 48.19
Gene sequence:
>1407_bases ATGTCTGAACACAACGAAGCCGCCAACCTGGTAAAAACTCTGCGGCCTTTCCATATATGGGCTCTTGGAGTAGGAATTGT TCTGGTCGGAGAGTATATGGGCTGGAACTTTACTGTTGCAAAAGGAGGAATTCTTGGTTCTCTGCTTGCCATGCTGGTTG CAGGAACAATGTATGTAATAATTGCCCTCTGTGCCAGTGAACTCGGATCAGCAACCAAACTTGCAGGAGGACCTTATGAT TGGGCGAGATTGTTCGTCGGACCCGGAGCAGCTGCCAGTGTAGGGCTTGCAGTATATATGGAATATATAGCCCTTGAAGC GGCGGATGCTATTGTTGTCGCATTTATTGCACAGAGCATCTTTCCGGAACTGCAGGTTTTTCCTGTAACATTGCTTGTAA TCGCACTTCTTACCTTCATTAACTACCGTGGCGTTGTTGCGGCACTGACCCTTAACTTTGTCCTGACGATGATCGCTTTC ATTGCAATAGTGGTCTTCTTCTTCGCAACTGCCTTTGGAGGAGTGAACATCCACCCTGAATATCTTTTCCAGGGAGCACT TCCAAACGGTATGATAGGACTCTTTGCAGCCCTGCAGTTTGGGCCCTGGTTCTATCTGGGAATAGAAGGAGCAGCAATGT GCGCTGAGGAATGTAAACACCCATCAAGGGCAGTACCTCTCGGACAGCAGGCCGGGATGATCACACTGCTTGTAGGAGCG GCAATGACACTCTATTTATGTTCCGTGCTGATCCCGACTGACCTTCTGGGAGTTTCCGTATATCCACTCTTTGAGGCTGC ACAGAACAGCGGCATATTTATATTCATCGCCCTGCTCGGGCTCGGGACATTCCTGACATGTGTTGCCAGTGCAAACGGAT GTGTCTGTGACTCTTCACGCTCCTGGTTTGCCCTTTCCAGAGATAAATATGTGTCTTCCTGGTTCTCGGCGGTGCACCCG AGGTATAATACCCCATACAGGGCAGTGATTTTCACAATGCCCGTTGCGATAGGCTTTGCATTCAGCGGTTTCCTTGACCA GGTAATTACTTTCTCCATTGTCTCGGGTCTTCTCTGCTATGTACTGATTCCTTTCTCCCTGATACGTTTCAGGAATCTCT TCCCGCAGACTACAAGCAAGGTCAGGCCTTTTGCAGGTCCTCTTCAGCCGTATATTGCTTACTTTGCAATAGCAATCGCA ATTACCATTCTTTCAACGCTGTTCTGGGGCTATAAATACAACCTGATCTTTGCCTTTGTGTTCTACGGCATTGCGTACTT CTACTTCAGCCACAGGCACAAGAATTCGAACATCGAAAACAACTGGGCTGAAATGGGCTGGCCATTACCCAATGGTTCGG AAAATGGAAGAATAGGAAAGGAGGCGGTAGGCTTTGGAGACGAATAA
Upstream 100 bases:
>100_bases GACTGTTATAAACGGACTGATATATCTTCTGGCTTTCGGGCTGATGGCCTGGGTTCTACTTGATGCCAGCAGGGTTTCAA AAAGAAGGGGTTGATACGGC
Downstream 100 bases:
>100_bases CCGGGAACTTGAAAGCAAATATCACAGCAAACTCAATGGAGATACGCTCCTTGTCATTGGCATGCTTGCTTTGCTAGTGG GCGTGGAAGGGTTCATAATA
Product: monomethylamine permease
Products: Proton [Cytoplasm]; 4-aminobutyrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSEHNEAANLVKTLRPFHIWALGVGIVLVGEYMGWNFTVAKGGILGSLLAMLVAGTMYVIIALCASELGSATKLAGGPYD WARLFVGPGAAASVGLAVYMEYIALEAADAIVVAFIAQSIFPELQVFPVTLLVIALLTFINYRGVVAALTLNFVLTMIAF IAIVVFFFATAFGGVNIHPEYLFQGALPNGMIGLFAALQFGPWFYLGIEGAAMCAEECKHPSRAVPLGQQAGMITLLVGA AMTLYLCSVLIPTDLLGVSVYPLFEAAQNSGIFIFIALLGLGTFLTCVASANGCVCDSSRSWFALSRDKYVSSWFSAVHP RYNTPYRAVIFTMPVAIGFAFSGFLDQVITFSIVSGLLCYVLIPFSLIRFRNLFPQTTSKVRPFAGPLQPYIAYFAIAIA ITILSTLFWGYKYNLIFAFVFYGIAYFYFSHRHKNSNIENNWAEMGWPLPNGSENGRIGKEAVGFGDE
Sequences:
>Translated_468_residues MSEHNEAANLVKTLRPFHIWALGVGIVLVGEYMGWNFTVAKGGILGSLLAMLVAGTMYVIIALCASELGSATKLAGGPYD WARLFVGPGAAASVGLAVYMEYIALEAADAIVVAFIAQSIFPELQVFPVTLLVIALLTFINYRGVVAALTLNFVLTMIAF IAIVVFFFATAFGGVNIHPEYLFQGALPNGMIGLFAALQFGPWFYLGIEGAAMCAEECKHPSRAVPLGQQAGMITLLVGA AMTLYLCSVLIPTDLLGVSVYPLFEAAQNSGIFIFIALLGLGTFLTCVASANGCVCDSSRSWFALSRDKYVSSWFSAVHP RYNTPYRAVIFTMPVAIGFAFSGFLDQVITFSIVSGLLCYVLIPFSLIRFRNLFPQTTSKVRPFAGPLQPYIAYFAIAIA ITILSTLFWGYKYNLIFAFVFYGIAYFYFSHRHKNSNIENNWAEMGWPLPNGSENGRIGKEAVGFGDE >Mature_467_residues SEHNEAANLVKTLRPFHIWALGVGIVLVGEYMGWNFTVAKGGILGSLLAMLVAGTMYVIIALCASELGSATKLAGGPYDW ARLFVGPGAAASVGLAVYMEYIALEAADAIVVAFIAQSIFPELQVFPVTLLVIALLTFINYRGVVAALTLNFVLTMIAFI AIVVFFFATAFGGVNIHPEYLFQGALPNGMIGLFAALQFGPWFYLGIEGAAMCAEECKHPSRAVPLGQQAGMITLLVGAA MTLYLCSVLIPTDLLGVSVYPLFEAAQNSGIFIFIALLGLGTFLTCVASANGCVCDSSRSWFALSRDKYVSSWFSAVHPR YNTPYRAVIFTMPVAIGFAFSGFLDQVITFSIVSGLLCYVLIPFSLIRFRNLFPQTTSKVRPFAGPLQPYIAYFAIAIAI TILSTLFWGYKYNLIFAFVFYGIAYFYFSHRHKNSNIENNWAEMGWPLPNGSENGRIGKEAVGFGDE
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI7657683, Length=378, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI71979932, Length=439, Percent_Identity=24.373576309795, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI115648063, Length=354, Percent_Identity=25.7062146892655, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI115648022, Length=354, Percent_Identity=25.7062146892655, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1789017, Length=425, Percent_Identity=23.2941176470588, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081708, Length=350, Percent_Identity=22.8571428571429, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324061, Length=495, Percent_Identity=21.2121212121212, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324990, Length=465, Percent_Identity=24.7311827956989, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641993, Length=438, Percent_Identity=24.8858447488584, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641995, Length=364, Percent_Identity=25.8241758241758, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50841; Mature: 50710
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHNEAANLVKTLRPFHIWALGVGIVLVGEYMGWNFTVAKGGILGSLLAMLVAGTMYVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH IALCASELGSATKLAGGPYDWARLFVGPGAAASVGLAVYMEYIALEAADAIVVAFIAQSI HHHHHHHHCCCHHCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPELQVFPVTLLVIALLTFINYRGVVAALTLNFVLTMIAFIAIVVFFFATAFGGVNIHPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YLFQGALPNGMIGLFAALQFGPWFYLGIEGAAMCAEECKHPSRAVPLGQQAGMITLLVGA HHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH AMTLYLCSVLIPTDLLGVSVYPLFEAAQNSGIFIFIALLGLGTFLTCVASANGCVCDSSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCC SWFALSRDKYVSSWFSAVHPRYNTPYRAVIFTMPVAIGFAFSGFLDQVITFSIVSGLLCY CEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIPFSLIRFRNLFPQTTSKVRPFAGPLQPYIAYFAIAIAITILSTLFWGYKYNLIFAFV HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYGIAYFYFSHRHKNSNIENNWAEMGWPLPNGSENGRIGKEAVGFGDE HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure SEHNEAANLVKTLRPFHIWALGVGIVLVGEYMGWNFTVAKGGILGSLLAMLVAGTMYVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH IALCASELGSATKLAGGPYDWARLFVGPGAAASVGLAVYMEYIALEAADAIVVAFIAQSI HHHHHHHHCCCHHCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPELQVFPVTLLVIALLTFINYRGVVAALTLNFVLTMIAFIAIVVFFFATAFGGVNIHPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YLFQGALPNGMIGLFAALQFGPWFYLGIEGAAMCAEECKHPSRAVPLGQQAGMITLLVGA HHHCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH AMTLYLCSVLIPTDLLGVSVYPLFEAAQNSGIFIFIALLGLGTFLTCVASANGCVCDSSR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCC SWFALSRDKYVSSWFSAVHPRYNTPYRAVIFTMPVAIGFAFSGFLDQVITFSIVSGLLCY CEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIPFSLIRFRNLFPQTTSKVRPFAGPLQPYIAYFAIAIAITILSTLFWGYKYNLIFAFV HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYGIAYFYFSHRHKNSNIENNWAEMGWPLPNGSENGRIGKEAVGFGDE HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 4-aminobutyrate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 4-aminobutyrate [Periplasm] = Proton [Cytoplasm] + 4-aminobutyrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]