| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227535
Identifier: 21227535
GI number: 21227535
Start: 1715089
End: 1715325
Strand: Reverse
Name: 21227535
Synonym: MM_1433
Alternate gene names: NA
Gene position: 1715325-1715089 (Counterclockwise)
Preceding gene: 21227536
Following gene: 21227534
Centisome position: 41.87
GC content: 45.15
Gene sequence:
>237_bases ATGACACAAAAGAATGTTATTACAGAGGTCTTTGATATCGTGTTTATCTTTGTCCTCGCCTTCGCCTGTGTGGTTATTCC CACAGTACTCCAGGGAGCTGTGCTCGTTTCCTGGGAAGAAGGAGGAGCAGGGATAGGATTTGTCTGGGACCCGGTAGGCT TCTTCAGTTTCTTGCTTGTGATAGTCGCTTTCTTTGCAGTGATCCTGTATCACTCAGTAAAACATTACAGGTATTGA
Upstream 100 bases:
>100_bases TCTGATCGTTTCGATCGAGGCTATCGGATGCCTGAGGGTAAGAGAGTCTATCAAAGCCCACATGTTCGAGTTCAAATACT ACGATTGAGGATGAGAAGAT
Downstream 100 bases:
>100_bases AAGACTGAAAAAATTAAAAGAAAATAAAAAATAAAATATTGCAAAAAACCGAAATATTGAAAGAATACTGGAAACTTTAG CTGAAAGTCTGCCTGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTQKNVITEVFDIVFIFVLAFACVVIPTVLQGAVLVSWEEGGAGIGFVWDPVGFFSFLLVIVAFFAVILYHSVKHYRY
Sequences:
>Translated_78_residues MTQKNVITEVFDIVFIFVLAFACVVIPTVLQGAVLVSWEEGGAGIGFVWDPVGFFSFLLVIVAFFAVILYHSVKHYRY >Mature_77_residues TQKNVITEVFDIVFIFVLAFACVVIPTVLQGAVLVSWEEGGAGIGFVWDPVGFFSFLLVIVAFFAVILYHSVKHYRY
Specific function: Unknown
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8746; Mature: 8615
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKNVITEVFDIVFIFVLAFACVVIPTVLQGAVLVSWEEGGAGIGFVWDPVGFFSFLLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCHHHCHHHHHHHHHH IVAFFAVILYHSVKHYRY HHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQKNVITEVFDIVFIFVLAFACVVIPTVLQGAVLVSWEEGGAGIGFVWDPVGFFSFLLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCCCCCCCHHHCHHHHHHHHHH IVAFFAVILYHSVKHYRY HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA