| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is secG
Identifier: 21227474
GI number: 21227474
Start: 1643373
End: 1643540
Strand: Direct
Name: secG
Synonym: MM_1372
Alternate gene names: 21227474
Gene position: 1643373-1643540 (Clockwise)
Preceding gene: 21227473
Following gene: 21227475
Centisome position: 40.12
GC content: 47.62
Gene sequence:
>168_bases ATGGCTAAAAAATCAGGTTCCGGACTTCAGTCTTCCGCAGGGCTCATGCGCTACTACGAAGCTGACAAAAATGCAATTCA CATCCAGCCCAAAACAGTGCTGATCGCAGGTGCTCTTGTGGGCATAGCAGTAATATTCTTAAGTGCTGTAAACGGCTTCT GGCCGTAA
Upstream 100 bases:
>100_bases TTAATATATGGAGTTAAATCTCCAGTAAGCTAAATCTTCCAATTAAAACGTAACAATTAACTAATTAGCATTACATTGCA TTCATACAGGTGTCTTACTC
Downstream 100 bases:
>100_bases TTGCTTTTTTCTGGCAGGGTACTCTTGAGCAAGAATGGTTCTGGAAAAAAAGTAATTGGAAAAACGAAAAGATCGTCTTC TGGCGCCAGAACTTTTAAAC
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: Protein transport protein Sec61 subunit beta homolog
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP
Sequences:
>Translated_55_residues MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP >Mature_54_residues AKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP
Specific function: Involved in protein export. The function of the beta subunit is unknown, but it may be involved in stabilization of the trimeric complex
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SEC61-beta family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECG_METMA (Q8PX50)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633396.1 - GeneID: 1479714 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1372 - NMPDR: fig|192952.1.peg.1372 - HOGENOM: HBG732980 - OMA: MRYYEAD - ProtClustDB: PRK01253 - BioCyc: MMAZ192952:MM1372-MONOMER - HAMAP: MF_00751 - InterPro: IPR005609
Pfam domain/function: PF03911 Sec61_beta
EC number: NA
Molecular weight: Translated: 5792; Mature: 5661
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe854aec)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP CCCCCCCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure AKKSGSGLQSSAGLMRYYEADKNAIHIQPKTVLIAGALVGIAVIFLSAVNGFWP CCCCCCCCCCCCHHHHHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12125824