| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is thiL [H]
Identifier: 21227467
GI number: 21227467
Start: 1633412
End: 1634425
Strand: Reverse
Name: thiL [H]
Synonym: MM_1365
Alternate gene names: 21227467
Gene position: 1634425-1633412 (Counterclockwise)
Preceding gene: 21227468
Following gene: 21227466
Centisome position: 39.9
GC content: 48.32
Gene sequence:
>1014_bases ATGAAAGAAACAAAAGTGTCTTCAATCGGAGAGCGTGCTTTAATCTCGCGCTTATCTGAGATTTTCAATGCCCCTGATGG AGAGGAAAGAAGACAGGAAGAAGTCCTGATAGGTGCCGGTTCTGATGACTGTGCTGTCCTTGACCTGAAAGGTGAAGACT ACCTGGTTGTTACGACTGATATGCTTCACATGACCACAGATTTTCCTGAAGGGATGACCCCCTGGCAGATGGGCTGGATG TCTGCAGCCGTAAACCTGAGCGATATAGCTGCCATGGGTGCAGAGCCCACAGGGCTGCTAATGGCAATAGGCATGCCTTC GGATACCGAAATCGCTTTTGTCGAAGAGCTTGCAAAAGGAATACAGGCATGTGCCGCGTTCTGCGGGACTTCTGTTATAG GAGGCGACCTTGATACCCATGCCGAGCTGACAATTACAGGGACAGCCCTGGGAAGAGTGAAAAAAAGCCAGCTCCTTCTT CGAAAAGGGGCAAAACCCGGAGACCTTGTCTGTGTAACGGGATATGCAGGGTCAGCCGGAGCTGCCCTTAAAGCGGTCCA GTCAAAAAAACCGGTGAGTGAAAACGTCCTGAAAGCTCTTTTTGAACCGGTCCCACGAACAAGGGAAGCTAAACAGCTTG CTGAGTCGGGTGCGGTCACGTCCATGATGGACACGAGTGACGGACTTGCTATGTCTCTTTACGACCTTTCCAGGCAGAGT AAAACAGGATTTAAAATCCGGGAAAATGCCCTTCCAATTCTCCCGGAAGTCAGGAAGTTTGCCTCAGGTCCAGAAGAACT TCTGGAATTTGCACTTTATACAGGCGGAGACTTCGAACTTATTTTTACAATTGATCCGGAACGCCTAAAAAAAGTACAAA ATATATGTAACTTGACTATCATAGGAGAATGCACAGAGTATGAAACTGGTATCATGCTTGAATCCCCGGAATGCAGGCTG ACAGCTATAAAACAGCTGGGATACCAGCAGCTAAAAGCCGAAACGGCTGATTAG
Upstream 100 bases:
>100_bases AAAAATTAAATAAAGGAGATTGACTCAGTCAATCTTAGCCCAAAAAAGGGAAAACATCTACAAAAAAGAAATAGGAAGTA ATCGCTTCTAAAAAATGACC
Downstream 100 bases:
>100_bases CTTTCCTGAATAACTGACGTTAATCCCCCATATATTAAAAGCCTGAAATGAAAGAAAAAATTAAGAAATAAAGACTGGAA GGCTTATACTACCATAAAAA
Product: thiamin-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MKETKVSSIGERALISRLSEIFNAPDGEERRQEEVLIGAGSDDCAVLDLKGEDYLVVTTDMLHMTTDFPEGMTPWQMGWM SAAVNLSDIAAMGAEPTGLLMAIGMPSDTEIAFVEELAKGIQACAAFCGTSVIGGDLDTHAELTITGTALGRVKKSQLLL RKGAKPGDLVCVTGYAGSAGAALKAVQSKKPVSENVLKALFEPVPRTREAKQLAESGAVTSMMDTSDGLAMSLYDLSRQS KTGFKIRENALPILPEVRKFASGPEELLEFALYTGGDFELIFTIDPERLKKVQNICNLTIIGECTEYETGIMLESPECRL TAIKQLGYQQLKAETAD
Sequences:
>Translated_337_residues MKETKVSSIGERALISRLSEIFNAPDGEERRQEEVLIGAGSDDCAVLDLKGEDYLVVTTDMLHMTTDFPEGMTPWQMGWM SAAVNLSDIAAMGAEPTGLLMAIGMPSDTEIAFVEELAKGIQACAAFCGTSVIGGDLDTHAELTITGTALGRVKKSQLLL RKGAKPGDLVCVTGYAGSAGAALKAVQSKKPVSENVLKALFEPVPRTREAKQLAESGAVTSMMDTSDGLAMSLYDLSRQS KTGFKIRENALPILPEVRKFASGPEELLEFALYTGGDFELIFTIDPERLKKVQNICNLTIIGECTEYETGIMLESPECRL TAIKQLGYQQLKAETAD >Mature_337_residues MKETKVSSIGERALISRLSEIFNAPDGEERRQEEVLIGAGSDDCAVLDLKGEDYLVVTTDMLHMTTDFPEGMTPWQMGWM SAAVNLSDIAAMGAEPTGLLMAIGMPSDTEIAFVEELAKGIQACAAFCGTSVIGGDLDTHAELTITGTALGRVKKSQLLL RKGAKPGDLVCVTGYAGSAGAALKAVQSKKPVSENVLKALFEPVPRTREAKQLAESGAVTSMMDTSDGLAMSLYDLSRQS KTGFKIRENALPILPEVRKFASGPEELLEFALYTGGDFELIFTIDPERLKKVQNICNLTIIGECTEYETGIMLESPECRL TAIKQLGYQQLKAETAD
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=283, Percent_Identity=32.8621908127208, Blast_Score=124, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 36271; Mature: 36271
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETKVSSIGERALISRLSEIFNAPDGEERRQEEVLIGAGSDDCAVLDLKGEDYLVVTTD CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCEEEEEECCCCEEEEEEH MLHMTTDFPEGMTPWQMGWMSAAVNLSDIAAMGAEPTGLLMAIGMPSDTEIAFVEELAKG HEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH IQACAAFCGTSVIGGDLDTHAELTITGTALGRVKKSQLLLRKGAKPGDLVCVTGYAGSAG HHHHHHHHCCHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH AALKAVQSKKPVSENVLKALFEPVPRTREAKQLAESGAVTSMMDTSDGLAMSLYDLSRQS HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHCCCC KTGFKIRENALPILPEVRKFASGPEELLEFALYTGGDFELIFTIDPERLKKVQNICNLTI CCCCEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCEEE IGECTEYETGIMLESPECRLTAIKQLGYQQLKAETAD EECCCCCCCCEEEECCCHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MKETKVSSIGERALISRLSEIFNAPDGEERRQEEVLIGAGSDDCAVLDLKGEDYLVVTTD CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCEEEEEECCCCEEEEEEH MLHMTTDFPEGMTPWQMGWMSAAVNLSDIAAMGAEPTGLLMAIGMPSDTEIAFVEELAKG HEEEECCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH IQACAAFCGTSVIGGDLDTHAELTITGTALGRVKKSQLLLRKGAKPGDLVCVTGYAGSAG HHHHHHHHCCHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCH AALKAVQSKKPVSENVLKALFEPVPRTREAKQLAESGAVTSMMDTSDGLAMSLYDLSRQS HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHCCCC KTGFKIRENALPILPEVRKFASGPEELLEFALYTGGDFELIFTIDPERLKKVQNICNLTI CCCCEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCEEE IGECTEYETGIMLESPECRLTAIKQLGYQQLKAETAD EECCCCCCCCEEEECCCHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]