| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is tauC [C]
Identifier: 21227463
GI number: 21227463
Start: 1626782
End: 1627570
Strand: Reverse
Name: tauC [C]
Synonym: MM_1361
Alternate gene names: 21227463
Gene position: 1627570-1626782 (Counterclockwise)
Preceding gene: 21227464
Following gene: 21227462
Centisome position: 39.73
GC content: 41.7
Gene sequence:
>789_bases ATGAAAATTAATTTCATAAAAACAATCGAAGAAAAAGGCATTGAAGCATTATCTCTTGTAATCGCGGTTGCCATATGGCA GCTTGTAGCGGATAGAATTGTACAGAACAAACTGCTTCTGCCAAGTTTTTATGATGTGGTAAACTCTTTTACCGTGATTG TTAAAAATGGACTAATTTATACGGATACCCTGACAAGTTTACTCCATTTCTCAATTGGTATTGCAGCTGCTTTTATACTT GGTATTCCTCTTGGAATAATCATGGGGTGGTTTAAAACGGCAAACAGGGCAATCGACCCTATAATAGAAATCCTGCGTCC GATCCCTCCTCTTGCCTGGATCCCTTTTGCAATAGTATGGTTCGGGCTCACACATCAGGCAGCAGGTTTCGTTGTGTTTG CAGGGATGATCTTCCCAATAATTATTAATACCTACACTGGTTTTAAGAACGTTCCACGAGTCTATGTTGAGGCAGCAAAG GTTCTTGGCTGTACACGTAATATAGACCTCATCCGCTATATTGCGATCCCTTCAGCTATGCCTTCGATTGCTGCAGGGAT AAGGATTGCAATGGGTGTAGGCTGGATGTGCCTTGTAGCAGCAGAGATGTTTGGAGTAAGCAATAGAGGGCTTGGTTACC AGATATGGCACAATTATTACCTGCACAGAATGGATTTCGTGCTTGTATATATGCTCCTGCTGGGGTTCATAGGTCTTTTC ATAGACCGTTTCTTCAGATACTATGTAGATGAAAAGCTTCTCAGATGGAAGTCAGGGACTGTGATGTAA
Upstream 100 bases:
>100_bases AAGCTGCCCCAAATATAAAAGGGGCAGTTTTGAACTTTAACCATCCTGAAAACAGAAAACTGCCGGAAAGATAAAAAACT AAGAATCCTTTTAATAAGAC
Downstream 100 bases:
>100_bases AAATGGGTAGAGTAAGTGTAAAAAACGTTTCACGCATCTTCACCAAAAAAGAAGATGGGTCCGGAACCGAAGCTCTGCAT AATATAAGTTTTGATGTGCA
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKINFIKTIEEKGIEALSLVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIYTDTLTSLLHFSIGIAAAFIL GIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGLTHQAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAK VLGCTRNIDLIRYIAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSNRGLGYQIWHNYYLHRMDFVLVYMLLLGFIGLF IDRFFRYYVDEKLLRWKSGTVM
Sequences:
>Translated_262_residues MKINFIKTIEEKGIEALSLVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIYTDTLTSLLHFSIGIAAAFIL GIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGLTHQAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAK VLGCTRNIDLIRYIAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSNRGLGYQIWHNYYLHRMDFVLVYMLLLGFIGLF IDRFFRYYVDEKLLRWKSGTVM >Mature_262_residues MKINFIKTIEEKGIEALSLVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIYTDTLTSLLHFSIGIAAAFIL GIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVWFGLTHQAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAK VLGCTRNIDLIRYIAIPSAMPSIAAGIRIAMGVGWMCLVAAEMFGVSNRGLGYQIWHNYYLHRMDFVLVYMLLLGFIGLF IDRFFRYYVDEKLLRWKSGTVM
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=216, Percent_Identity=31.9444444444444, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI87081802, Length=235, Percent_Identity=34.0425531914894, Blast_Score=111, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29517; Mature: 29517
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINFIKTIEEKGIEALSLVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEE TDTLTSLLHFSIGIAAAFILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FGLTHQAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSAM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHH PSIAAGIRIAMGVGWMCLVAAEMFGVSNRGLGYQIWHNYYLHRMDFVLVYMLLLGFIGLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDRFFRYYVDEKLLRWKSGTVM HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKINFIKTIEEKGIEALSLVIAVAIWQLVADRIVQNKLLLPSFYDVVNSFTVIVKNGLIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEE TDTLTSLLHFSIGIAAAFILGIPLGIIMGWFKTANRAIDPIIEILRPIPPLAWIPFAIVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FGLTHQAAGFVVFAGMIFPIIINTYTGFKNVPRVYVEAAKVLGCTRNIDLIRYIAIPSAM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHH PSIAAGIRIAMGVGWMCLVAAEMFGVSNRGLGYQIWHNYYLHRMDFVLVYMLLLGFIGLF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDRFFRYYVDEKLLRWKSGTVM HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]