Click here to switch to the map view.

The map label for this gene is 21227457

Identifier: 21227457

GI number: 21227457

Start: 1624178

End: 1624384

Strand: Direct

Name: 21227457

Synonym: MM_1355

Alternate gene names: NA

Gene position: 1624178-1624384 (Clockwise)

Preceding gene: 21227455

Following gene: 21227458

Centisome position: 39.65

GC content: 45.41

Gene sequence:

>207_bases
ATGTTTAGAGATGAACGTATTTCTGTGCCCGTTGAAGAGGGTGAAACTTACGACGTAACTATTCAGGATATTGCTCGCCA
GGGAGACGGCATTGCCCGTATCGAAGGCTTTGTGGTTTTTGTCCCGAATACCAGTGTAGGCGACGAAGTCCAGATTAAAG
TCGAAAGGGTACTTCCGAAATTTGCATTTGCAAGCGTTGTTGAGTAA

Upstream 100 bases:

>100_bases
GTTCTTCAAGTTTGGCCTGTAAAGTACTGTTTTTACTCTTTTCTGTTCTGTCCATGGAGCTTTAATAAGCTGATTAATAG
AAGTCAAAGGAATGAATCTA

Downstream 100 bases:

>100_bases
GTTTGGGTTGAGAGAATAATTACGCAGTATTTTAAATTTTGTTAGTAAATTAAAGGAATGGTTTTCATGTTCAGAGAAGA
AAGTCGCCCGGTCCCTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MFRDERISVPVEEGETYDVTIQDIARQGDGIARIEGFVVFVPNTSVGDEVQIKVERVLPKFAFASVVE

Sequences:

>Translated_68_residues
MFRDERISVPVEEGETYDVTIQDIARQGDGIARIEGFVVFVPNTSVGDEVQIKVERVLPKFAFASVVE
>Mature_68_residues
MFRDERISVPVEEGETYDVTIQDIARQGDGIARIEGFVVFVPNTSVGDEVQIKVERVLPKFAFASVVE

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01938 TRAM [H]

EC number: NA

Molecular weight: Translated: 7600; Mature: 7600

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRDERISVPVEEGETYDVTIQDIARQGDGIARIEGFVVFVPNTSVGDEVQIKVERVLPK
CCCCCCEECCCCCCCEEEEEHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEHHHHCCH
FAFASVVE
HHHHHHCC
>Mature Secondary Structure
MFRDERISVPVEEGETYDVTIQDIARQGDGIARIEGFVVFVPNTSVGDEVQIKVERVLPK
CCCCCCEECCCCCCCEEEEEHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEEHHHHCCH
FAFASVVE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]