The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227439

Identifier: 21227439

GI number: 21227439

Start: 1595244

End: 1596833

Strand: Reverse

Name: 21227439

Synonym: MM_1337

Alternate gene names: NA

Gene position: 1596833-1595244 (Counterclockwise)

Preceding gene: 21227440

Following gene: 21227429

Centisome position: 38.98

GC content: 48.68

Gene sequence:

>1590_bases
ATGGTAGCTCTCGCATCCAGCGCATCTGCTGCCGCACCGGAGCCATCTTATGGTACAGCGGTTGTAGACGGAAAATATAT
TGAATGGGATCTGGGTGCTGACCATTTTGCTGATATGCATGAGGCGTATAACGCAAACAAAGACGTCCTTTCAAAGCTTT
ATCTGCGTTATAACTGCAGCGCAAAAGTAATGTATGTTCTTGTGTTGCGTGTACCACCTTATGAGGTTCAACCCACTGCT
GATGATGCATGGGTTAGAATTGATAGTGCAGAAGGGGCGCCGGTAGTTTCAGGAACAACTGGAAATGATGGAATACCACC
TGATTTTGAGTGGGTCAAAAACGACACTGGAACTATAATTGGTTACGAAGCATCGTTCCCTCTTGAACCTGGTACTCACA
CAATTGGAGCACATATACAAATACAACCTGGCAGGACATCTGGAACAATAGATAAGCAAATTCCTCTTGTAATAAATTGT
CAGCAACGCGAGGAACTCACGGTCAGCAAAACTGCCATCACCTCTTACACCCGTACCCACAACTGGGACATCACTAAGTC
TGTTACCACCAAAAATGGATACACGCACGAAGGATTCCCAAAAATCTGGCTCTACATAGATGGACGTGGCAATGAAACAG
CTACGTGGACGGTGGACGTGAAGCATAAAGGTTGTGAAGACAGTGACTTCGACGTTTCAGGTGTAATCACTATTGAAAAC
ACTGGAGACCTACCCGCAAATATCACCGACATTAGTGATGTTCTCGGTGAAACTGGAATTCAGGTTACCGTTTCCGGAAT
TGAACTTCCATACACGCTGCCTGCCGGGGAAACCCTAGAGCTTAGATACAGCCAGGCCGTCGATAGTATGATAGATGGCT
CCAATGATGTGACGGTAACGACCGAGAGGGACAATTATGACGCGAGCGCTGAAATAGTCTGGAGTGAAACACCCACTACA
GAGAACTACAAGACCATCAATGTTGTCGACTTTAGCGACCTCTTTGGCGAACAAACTCTCGGCACAGTAACTGCCCCAGA
AAACGCGCAGTTTACCTACTCCAAGGACTTTGCATGGGAAGACTACGGCAAGGACGCAGGTGGCGATTATGTCTACAACA
ATGAGGCAACCATAGTTGAGACGGGAGATTCTGACGATGCCACACTAAAGGTCAATGTCCAGAGCTACATGTATGAAACG
GCCTACGCCAAGGGCGATGGAGCAACCTGTTTCATCCCCACCTTCAAAAATTGGGGCTGGACCAACCTGATTTCTCCCGG
CACCTACGAGATGGACCTTTGGGCCGGTGCCGCACAGTGTGATACCTCTAAGGGAACCCTGGTCGGCTCGGTGACTGTGA
CGTACGGCAGCGATGGCTATGTAACTGCGGACTATAACGTGGGCACGCCCTACATCCTAGAAGAAACCCATGTGTATGCC
GGTTACGAAATGTTCCCGATGGACAAAAAAGGTAACCCAACGGTTGCACCAGGAGCATACTCCAACGCCAGTCCGTTTGA
CGGTCGAGATGTCTATGTCATCGCACACGCGGTGGTAGGAATTCCTGACCCGAATTTTGGTCCTGAGTGA

Upstream 100 bases:

>100_bases
AGAAAAACCTGGAAGTGAATAAATGAAAAATCTAAAAAGTGAAATTCTGGAAACGAATATAACAAAGATGGTCTTGCTTT
CCATAGCTTTTACAATAGCA

Downstream 100 bases:

>100_bases
ATGAAGACGAAAAAACCCGGGATGCATCCCGCTCCCGGGAATAGTTTTTTTGAGAAGGTATCCAATAATAACTATGGTTT
TTTGAATGAATTCAAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MVALASSASAAAPEPSYGTAVVDGKYIEWDLGADHFADMHEAYNANKDVLSKLYLRYNCSAKVMYVLVLRVPPYEVQPTA
DDAWVRIDSAEGAPVVSGTTGNDGIPPDFEWVKNDTGTIIGYEASFPLEPGTHTIGAHIQIQPGRTSGTIDKQIPLVINC
QQREELTVSKTAITSYTRTHNWDITKSVTTKNGYTHEGFPKIWLYIDGRGNETATWTVDVKHKGCEDSDFDVSGVITIEN
TGDLPANITDISDVLGETGIQVTVSGIELPYTLPAGETLELRYSQAVDSMIDGSNDVTVTTERDNYDASAEIVWSETPTT
ENYKTINVVDFSDLFGEQTLGTVTAPENAQFTYSKDFAWEDYGKDAGGDYVYNNEATIVETGDSDDATLKVNVQSYMYET
AYAKGDGATCFIPTFKNWGWTNLISPGTYEMDLWAGAAQCDTSKGTLVGSVTVTYGSDGYVTADYNVGTPYILEETHVYA
GYEMFPMDKKGNPTVAPGAYSNASPFDGRDVYVIAHAVVGIPDPNFGPE

Sequences:

>Translated_529_residues
MVALASSASAAAPEPSYGTAVVDGKYIEWDLGADHFADMHEAYNANKDVLSKLYLRYNCSAKVMYVLVLRVPPYEVQPTA
DDAWVRIDSAEGAPVVSGTTGNDGIPPDFEWVKNDTGTIIGYEASFPLEPGTHTIGAHIQIQPGRTSGTIDKQIPLVINC
QQREELTVSKTAITSYTRTHNWDITKSVTTKNGYTHEGFPKIWLYIDGRGNETATWTVDVKHKGCEDSDFDVSGVITIEN
TGDLPANITDISDVLGETGIQVTVSGIELPYTLPAGETLELRYSQAVDSMIDGSNDVTVTTERDNYDASAEIVWSETPTT
ENYKTINVVDFSDLFGEQTLGTVTAPENAQFTYSKDFAWEDYGKDAGGDYVYNNEATIVETGDSDDATLKVNVQSYMYET
AYAKGDGATCFIPTFKNWGWTNLISPGTYEMDLWAGAAQCDTSKGTLVGSVTVTYGSDGYVTADYNVGTPYILEETHVYA
GYEMFPMDKKGNPTVAPGAYSNASPFDGRDVYVIAHAVVGIPDPNFGPE
>Mature_529_residues
MVALASSASAAAPEPSYGTAVVDGKYIEWDLGADHFADMHEAYNANKDVLSKLYLRYNCSAKVMYVLVLRVPPYEVQPTA
DDAWVRIDSAEGAPVVSGTTGNDGIPPDFEWVKNDTGTIIGYEASFPLEPGTHTIGAHIQIQPGRTSGTIDKQIPLVINC
QQREELTVSKTAITSYTRTHNWDITKSVTTKNGYTHEGFPKIWLYIDGRGNETATWTVDVKHKGCEDSDFDVSGVITIEN
TGDLPANITDISDVLGETGIQVTVSGIELPYTLPAGETLELRYSQAVDSMIDGSNDVTVTTERDNYDASAEIVWSETPTT
ENYKTINVVDFSDLFGEQTLGTVTAPENAQFTYSKDFAWEDYGKDAGGDYVYNNEATIVETGDSDDATLKVNVQSYMYET
AYAKGDGATCFIPTFKNWGWTNLISPGTYEMDLWAGAAQCDTSKGTLVGSVTVTYGSDGYVTADYNVGTPYILEETHVYA
GYEMFPMDKKGNPTVAPGAYSNASPFDGRDVYVIAHAVVGIPDPNFGPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57502; Mature: 57502

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALASSASAAAPEPSYGTAVVDGKYIEWDLGADHFADMHEAYNANKDVLSKLYLRYNCS
CEEEECCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHHCCCHHHHHHEEEEECCC
AKVMYVLVLRVPPYEVQPTADDAWVRIDSAEGAPVVSGTTGNDGIPPDFEWVKNDTGTII
CEEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHEECCCCEEE
GYEASFPLEPGTHTIGAHIQIQPGRTSGTIDKQIPLVINCQQREELTVSKTAITSYTRTH
EEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEEEEC
NWDITKSVTTKNGYTHEGFPKIWLYIDGRGNETATWTVDVKHKGCEDSDFDVSGVITIEN
CCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECC
TGDLPANITDISDVLGETGIQVTVSGIELPYTLPAGETLELRYSQAVDSMIDGSNDVTVT
CCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCEEEE
TERDNYDASAEIVWSETPTTENYKTINVVDFSDLFGEQTLGTVTAPENAQFTYSKDFAWE
EECCCCCCCEEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCCHH
DYGKDAGGDYVYNNEATIVETGDSDDATLKVNVQSYMYETAYAKGDGATCFIPTFKNWGW
HCCCCCCCCEEECCCEEEEECCCCCCCEEEEEHHHEEEEEEEECCCCCEEEEECCCCCCC
TNLISPGTYEMDLWAGAAQCDTSKGTLVGSVTVTYGSDGYVTADYNVGTPYILEETHVYA
CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEECCEEEE
GYEMFPMDKKGNPTVAPGAYSNASPFDGRDVYVIAHAVVGIPDPNFGPE
CEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MVALASSASAAAPEPSYGTAVVDGKYIEWDLGADHFADMHEAYNANKDVLSKLYLRYNCS
CEEEECCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHHCCCHHHHHHEEEEECCC
AKVMYVLVLRVPPYEVQPTADDAWVRIDSAEGAPVVSGTTGNDGIPPDFEWVKNDTGTII
CEEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHEECCCCEEE
GYEASFPLEPGTHTIGAHIQIQPGRTSGTIDKQIPLVINCQQREELTVSKTAITSYTRTH
EEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEEEEC
NWDITKSVTTKNGYTHEGFPKIWLYIDGRGNETATWTVDVKHKGCEDSDFDVSGVITIEN
CCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECC
TGDLPANITDISDVLGETGIQVTVSGIELPYTLPAGETLELRYSQAVDSMIDGSNDVTVT
CCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEHHHHHHHHHCCCCCEEEE
TERDNYDASAEIVWSETPTTENYKTINVVDFSDLFGEQTLGTVTAPENAQFTYSKDFAWE
EECCCCCCCEEEEECCCCCCCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCCHH
DYGKDAGGDYVYNNEATIVETGDSDDATLKVNVQSYMYETAYAKGDGATCFIPTFKNWGW
HCCCCCCCCEEECCCEEEEECCCCCCCEEEEEHHHEEEEEEEECCCCCEEEEECCCCCCC
TNLISPGTYEMDLWAGAAQCDTSKGTLVGSVTVTYGSDGYVTADYNVGTPYILEETHVYA
CCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEECCEEEE
GYEMFPMDKKGNPTVAPGAYSNASPFDGRDVYVIAHAVVGIPDPNFGPE
CEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA