Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 21227431

GI number: 21227431

Start: 1585442

End: 1587511

Strand: Direct

Name: trg [C]

Synonym: MM_1329

Alternate gene names: 21227431

Gene position: 1585442-1587511 (Clockwise)

Preceding gene: 21227430

Following gene: 21227432

Centisome position: 38.7

GC content: 41.21

Gene sequence:

>2070_bases
ATGTATAAAAGTACAAAAATAGGGCATGTAGTGATAGGGTTTGCCCTACTCCTGATTTTGATCTTTTTTGTAGGTTATAC
AGGTTATCAGGGCATGAACGAAGTTGATAAGAAGAGCCGGGCTATCCAGAATATGACTTTTATCATGAATAATATGCAGG
ACGCCCTGCAAGCTGAAGAAAGCTATGTTATTCACGGCGATCCTGCCTACAAAAAAGAAGTTTATCATTATCTCAGTTTT
GTGCCCACACAGGCAGAGATATCCAAAGTGATATACATAGGCTACCTTGACCCTGAGAACCGTGACAGAATGGATCTTGT
CCTTGAAGCTTCCAGGGAATTCAATGAAACTTTTAACAGATATGTTGAAGCAGAAGACGAACAGGCTAAGGTAAGGAGTA
AACTTGTTAATGATAGTGAAATTCTAATCATAAACGCAGATAAGCTTTCTAAAAATCAGATGGTCCAGTACAGAGAGGAA
TTTGAGGCCGGGTACTCAAATGAGACCCTCGAGAAAAAATTTTCCAATGCCGAGAGCGCTCAAAGGATAATTGTACTGAC
AATGAAAGCTCAAAATGAGTATCAAAATTATGCTATGAGCCCCGACCAGCAATATGCAGATAATTTCAATGTGTTTATGG
AAGAAATTATTGAACTTTCTACAGACTTAAACAGGAGGATGGATAGGCCGGAAAATATTGCTGCAGGGAATGAGATACTT
AGAAGTGCCGAAGATTTCCAGGCAGATTTCGAGCAATTTAAGGTTCTGGAAGAAAGAAAAACGCTCGAAGAGAAAAATAT
GATGTCTATAGCCACAAGAGTTGGAGAAGTGGCTGAAGCCGCCAGTGCTGACCAGAAAGAAAAACTGGATGTGCTAATTA
CAAATTCCGTAAACAAAATTTTTCTGGTAACTTTCCTTTCATTGCTTATCGGCGGTTTACTTGTTTTTGTAATTATGAAT
ATTTACAGAAAGCCCATCAACGAACTGCTTGAGGCTTCTGATATGGTTTCTGAAGGAAACCTTGACGTTGATATTAAAGG
TTCCTCCAGAAGCGAGATCTTTCAGCTCTCGGAGGCTTTTAAAGCGATGGTTGAAAACCTGTGCAGCTTGATTAAAGAAA
TTCAGGAAGGATCACTGCATCTTGCCACACTTTCGGAAGAAATGTCTGCCTCTTCCGAAGAAGTAGCATCTGCATCAAGG
AGAATTTCAGAAACAGCAGCCGAGATATCTAACGGGGCAGAAGTACAGAGCACGAAAATTATTGATATAACTCATGCGAT
GCAGGATATGACCCATAATATTCAGGAAATTGCGGATAATACGCAGAAAGTTTCTAAAAGCACAAATCTGGTAAATGATA
CCGTTTATAATATTGGAAATGTCTCCAGGGATGTCCTGTTAAAAATGGACCTTATAAGTTCTTCTGTCGATGAAACTGAA
ATTGTTATAAAGGACCTTGACTCAAAATCTCAACAAATAAATGAAATTATAACTCTGATTACAAGGATTGCAGACCAGAC
CAATATGCTTGCATTGAATGCCGCAATTGAAGCTGCACGTGCAGGGGAACACGGCAGAGGATTTTCCGTGGTGGCTGATG
AAGTCCGCAAACTTGCTGAAGAGTCCGGAACCGCAGCTAAGGATATTTCCAGATTGATCGATGAAATCAGGGAAAGCATC
AGTGATACGGTTGAAAGCATAGATGCAAGTAAGAAGAATGTAAAGAATGGTTCATTATCAGTCAGCGAAGAGGTCGAGAT
GGTTACAGGGATCGTTTCCACAATCAACGAGATCACCAATATGATAGAGGATGTTGCAGCCGCCACAGAAGAGCAGTCCG
CGTCCATTGAAGAAATCACCTCTACACTGGAGGATATATCTTCCATATCCGAACAATCCGCTGCAGGGACTCAGGAAACT
GCCGCGGCCCTGGAAGAGCAGAGCGCCTCAATGGCTGAGCTTGCCAGCATGGCTAACGACCTCTCTTTGCTTGGCGAGAA
GATGAAAAAAGTCACTGAAAAGTTCAGGCTCGGAAATTCGAAAGGTGAGTCAGAAAATATTTCTGACTAA

Upstream 100 bases:

>100_bases
CTGAAGATGTGTGTCTCTGCCTTTTACAGGTATTATCTGTATCCGGTTTTAGGCAGATAGACTACAGAAGTTAAGATGCT
GGAAGCACGGGTGAAAAAAG

Downstream 100 bases:

>100_bases
ATGTTTCAGCCCACCGAACTGGTTAAATAAGGCTGGCTAAAACGAATCAGTTAAATATTTCAGGCTAAAAAACTTGTCAA
ATAAGGTCTACTGAGACGGG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MYKSTKIGHVVIGFALLLILIFFVGYTGYQGMNEVDKKSRAIQNMTFIMNNMQDALQAEESYVIHGDPAYKKEVYHYLSF
VPTQAEISKVIYIGYLDPENRDRMDLVLEASREFNETFNRYVEAEDEQAKVRSKLVNDSEILIINADKLSKNQMVQYREE
FEAGYSNETLEKKFSNAESAQRIIVLTMKAQNEYQNYAMSPDQQYADNFNVFMEEIIELSTDLNRRMDRPENIAAGNEIL
RSAEDFQADFEQFKVLEERKTLEEKNMMSIATRVGEVAEAASADQKEKLDVLITNSVNKIFLVTFLSLLIGGLLVFVIMN
IYRKPINELLEASDMVSEGNLDVDIKGSSRSEIFQLSEAFKAMVENLCSLIKEIQEGSLHLATLSEEMSASSEEVASASR
RISETAAEISNGAEVQSTKIIDITHAMQDMTHNIQEIADNTQKVSKSTNLVNDTVYNIGNVSRDVLLKMDLISSSVDETE
IVIKDLDSKSQQINEIITLITRIADQTNMLALNAAIEAARAGEHGRGFSVVADEVRKLAEESGTAAKDISRLIDEIRESI
SDTVESIDASKKNVKNGSLSVSEEVEMVTGIVSTINEITNMIEDVAAATEEQSASIEEITSTLEDISSISEQSAAGTQET
AAALEEQSASMAELASMANDLSLLGEKMKKVTEKFRLGNSKGESENISD

Sequences:

>Translated_689_residues
MYKSTKIGHVVIGFALLLILIFFVGYTGYQGMNEVDKKSRAIQNMTFIMNNMQDALQAEESYVIHGDPAYKKEVYHYLSF
VPTQAEISKVIYIGYLDPENRDRMDLVLEASREFNETFNRYVEAEDEQAKVRSKLVNDSEILIINADKLSKNQMVQYREE
FEAGYSNETLEKKFSNAESAQRIIVLTMKAQNEYQNYAMSPDQQYADNFNVFMEEIIELSTDLNRRMDRPENIAAGNEIL
RSAEDFQADFEQFKVLEERKTLEEKNMMSIATRVGEVAEAASADQKEKLDVLITNSVNKIFLVTFLSLLIGGLLVFVIMN
IYRKPINELLEASDMVSEGNLDVDIKGSSRSEIFQLSEAFKAMVENLCSLIKEIQEGSLHLATLSEEMSASSEEVASASR
RISETAAEISNGAEVQSTKIIDITHAMQDMTHNIQEIADNTQKVSKSTNLVNDTVYNIGNVSRDVLLKMDLISSSVDETE
IVIKDLDSKSQQINEIITLITRIADQTNMLALNAAIEAARAGEHGRGFSVVADEVRKLAEESGTAAKDISRLIDEIRESI
SDTVESIDASKKNVKNGSLSVSEEVEMVTGIVSTINEITNMIEDVAAATEEQSASIEEITSTLEDISSISEQSAAGTQET
AAALEEQSASMAELASMANDLSLLGEKMKKVTEKFRLGNSKGESENISD
>Mature_689_residues
MYKSTKIGHVVIGFALLLILIFFVGYTGYQGMNEVDKKSRAIQNMTFIMNNMQDALQAEESYVIHGDPAYKKEVYHYLSF
VPTQAEISKVIYIGYLDPENRDRMDLVLEASREFNETFNRYVEAEDEQAKVRSKLVNDSEILIINADKLSKNQMVQYREE
FEAGYSNETLEKKFSNAESAQRIIVLTMKAQNEYQNYAMSPDQQYADNFNVFMEEIIELSTDLNRRMDRPENIAAGNEIL
RSAEDFQADFEQFKVLEERKTLEEKNMMSIATRVGEVAEAASADQKEKLDVLITNSVNKIFLVTFLSLLIGGLLVFVIMN
IYRKPINELLEASDMVSEGNLDVDIKGSSRSEIFQLSEAFKAMVENLCSLIKEIQEGSLHLATLSEEMSASSEEVASASR
RISETAAEISNGAEVQSTKIIDITHAMQDMTHNIQEIADNTQKVSKSTNLVNDTVYNIGNVSRDVLLKMDLISSSVDETE
IVIKDLDSKSQQINEIITLITRIADQTNMLALNAAIEAARAGEHGRGFSVVADEVRKLAEESGTAAKDISRLIDEIRESI
SDTVESIDASKKNVKNGSLSVSEEVEMVTGIVSTINEITNMIEDVAAATEEQSASIEEITSTLEDISSISEQSAAGTQET
AAALEEQSASMAELASMANDLSLLGEKMKKVTEKFRLGNSKGESENISD

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=613, Percent_Identity=27.2430668841762, Blast_Score=152, Evalue=7e-38,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=29.0625, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI2367378, Length=336, Percent_Identity=27.6785714285714, Blast_Score=126, Evalue=5e-30,
Organism=Escherichia coli, GI1788194, Length=394, Percent_Identity=27.9187817258883, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1789453, Length=247, Percent_Identity=31.9838056680162, Blast_Score=103, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 76636; Mature: 76636

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKSTKIGHVVIGFALLLILIFFVGYTGYQGMNEVDKKSRAIQNMTFIMNNMQDALQAEE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SYVIHGDPAYKKEVYHYLSFVPTQAEISKVIYIGYLDPENRDRMDLVLEASREFNETFNR
CEEEECCCHHHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
YVEAEDEQAKVRSKLVNDSEILIINADKLSKNQMVQYREEFEAGYSNETLEKKFSNAESA
HHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHC
QRIIVLTMKAQNEYQNYAMSPDQQYADNFNVFMEEIIELSTDLNRRMDRPENIAAGNEIL
CEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSAEDFQADFEQFKVLEERKTLEEKNMMSIATRVGEVAEAASADQKEKLDVLITNSVNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHH
FLVTFLSLLIGGLLVFVIMNIYRKPINELLEASDMVSEGNLDVDIKGSSRSEIFQLSEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
KAMVENLCSLIKEIQEGSLHLATLSEEMSASSEEVASASRRISETAAEISNGAEVQSTKI
HHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
IDITHAMQDMTHNIQEIADNTQKVSKSTNLVNDTVYNIGNVSRDVLLKMDLISSSVDETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
IVIKDLDSKSQQINEIITLITRIADQTNMLALNAAIEAARAGEHGRGFSVVADEVRKLAE
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ESGTAAKDISRLIDEIRESISDTVESIDASKKNVKNGSLSVSEEVEMVTGIVSTINEITN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MIEDVAAATEEQSASIEEITSTLEDISSISEQSAAGTQETAAALEEQSASMAELASMAND
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSLLGEKMKKVTEKFRLGNSKGESENISD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYKSTKIGHVVIGFALLLILIFFVGYTGYQGMNEVDKKSRAIQNMTFIMNNMQDALQAEE
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SYVIHGDPAYKKEVYHYLSFVPTQAEISKVIYIGYLDPENRDRMDLVLEASREFNETFNR
CEEEECCCHHHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
YVEAEDEQAKVRSKLVNDSEILIINADKLSKNQMVQYREEFEAGYSNETLEKKFSNAESA
HHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHC
QRIIVLTMKAQNEYQNYAMSPDQQYADNFNVFMEEIIELSTDLNRRMDRPENIAAGNEIL
CEEEEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSAEDFQADFEQFKVLEERKTLEEKNMMSIATRVGEVAEAASADQKEKLDVLITNSVNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCHHH
FLVTFLSLLIGGLLVFVIMNIYRKPINELLEASDMVSEGNLDVDIKGSSRSEIFQLSEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
KAMVENLCSLIKEIQEGSLHLATLSEEMSASSEEVASASRRISETAAEISNGAEVQSTKI
HHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
IDITHAMQDMTHNIQEIADNTQKVSKSTNLVNDTVYNIGNVSRDVLLKMDLISSSVDETE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHH
IVIKDLDSKSQQINEIITLITRIADQTNMLALNAAIEAARAGEHGRGFSVVADEVRKLAE
HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ESGTAAKDISRLIDEIRESISDTVESIDASKKNVKNGSLSVSEEVEMVTGIVSTINEITN
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MIEDVAAATEEQSASIEEITSTLEDISSISEQSAAGTQETAAALEEQSASMAELASMAND
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LSLLGEKMKKVTEKFRLGNSKGESENISD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA