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The map label for this gene is cheD

Identifier: 21227424

GI number: 21227424

Start: 1576691

End: 1577170

Strand: Reverse

Name: cheD

Synonym: MM_1322

Alternate gene names: 21227424

Gene position: 1577170-1576691 (Counterclockwise)

Preceding gene: 21227425

Following gene: 21227423

Centisome position: 38.5

GC content: 39.38

Gene sequence:

>480_bases
TTGGTCAATTCGGACATAATCACGGTGGGGATAGGAGATTGTGCAATAGCTAGAAGCCCCATGAAAATTAAAACCTCCGG
ACTGGGTTCCTGCCTTGGAATAACCCTCTATGATAGACAGAAAAAGATAGGTGGCCTTCTCCATACCATGCTTCCAAACA
TAAAAGATGCAAAACTAAAAGATAATCCTGCCAAATTTACAGATGCGGGAATAGAGTATCTTGTAGACGAGATGATCAGA
AGAGGAGGTTCCATAGATAAACTTGAAGCAAAAGTTGTAGGGGGAGCGGGAATGTTTGAAAATTCACGCCTGAATATAGG
TGAGAGAAACATTAAAAGTGCCAGAGAAACAATGAAAAAACTGGGAGTGTCTATTATAGCTGAGGACGTGGGGAAAAACT
ACGGACGTACAGTAATATTCGATACTCTTACTGGAGATCTTCTTATAAAGACAATTCTAAAAGGGGATAAATTAATTTAA

Upstream 100 bases:

>100_bases
AATAACTTAAAATCAATAACTTAAACCGATAAAAATTCAAACAGGTGAATTTTGAACTAACCGGTGTTATGAAAATAGAC
TTATAAGGAGGTTTTACAGA

Downstream 100 bases:

>100_bases
GAATTTATTATCTAGTTTAATATTAATATCTAGTTTTGTACTTAATTGCATTTAATTACCCATTTTATACCATATTTCAG
TTTCTTATCTTGTTATCCAG

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MVNSDIITVGIGDCAIARSPMKIKTSGLGSCLGITLYDRQKKIGGLLHTMLPNIKDAKLKDNPAKFTDAGIEYLVDEMIR
RGGSIDKLEAKVVGGAGMFENSRLNIGERNIKSARETMKKLGVSIIAEDVGKNYGRTVIFDTLTGDLLIKTILKGDKLI

Sequences:

>Translated_159_residues
MVNSDIITVGIGDCAIARSPMKIKTSGLGSCLGITLYDRQKKIGGLLHTMLPNIKDAKLKDNPAKFTDAGIEYLVDEMIR
RGGSIDKLEAKVVGGAGMFENSRLNIGERNIKSARETMKKLGVSIIAEDVGKNYGRTVIFDTLTGDLLIKTILKGDKLI
>Mature_159_residues
MVNSDIITVGIGDCAIARSPMKIKTSGLGSCLGITLYDRQKKIGGLLHTMLPNIKDAKLKDNPAKFTDAGIEYLVDEMIR
RGGSIDKLEAKVVGGAGMFENSRLNIGERNIKSARETMKKLGVSIIAEDVGKNYGRTVIFDTLTGDLLIKTILKGDKLI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED2_METMA (Q8PXA0)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_633346.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q8PXA0
- SMR:   Q8PXA0
- GeneID:   1479664
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_1322
- NMPDR:   fig|192952.1.peg.1322
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- ProtClustDB:   PRK13488
- BioCyc:   MMAZ192952:MM1322-MONOMER
- BRENDA:   3.5.1.44
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 17197; Mature: 17197

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSDIITVGIGDCAIARSPMKIKTSGLGSCLGITLYDRQKKIGGLLHTMLPNIKDAKLK
CCCCCEEEEECCCHHHCCCCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCC
DNPAKFTDAGIEYLVDEMIRRGGSIDKLEAKVVGGAGMFENSRLNIGERNIKSARETMKK
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LGVSIIAEDVGKNYGRTVIFDTLTGDLLIKTILKGDKLI
HHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVNSDIITVGIGDCAIARSPMKIKTSGLGSCLGITLYDRQKKIGGLLHTMLPNIKDAKLK
CCCCCEEEEECCCHHHCCCCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCC
DNPAKFTDAGIEYLVDEMIRRGGSIDKLEAKVVGGAGMFENSRLNIGERNIKSARETMKK
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
LGVSIIAEDVGKNYGRTVIFDTLTGDLLIKTILKGDKLI
HHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824