| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is putP [H]
Identifier: 21227417
GI number: 21227417
Start: 1566242
End: 1566442
Strand: Direct
Name: putP [H]
Synonym: MM_1315
Alternate gene names: 21227417
Gene position: 1566242-1566442 (Clockwise)
Preceding gene: 21227412
Following gene: 21227418
Centisome position: 38.24
GC content: 39.8
Gene sequence:
>201_bases ATGGTACCGGATAACATTAATATCGTAGTTATTTTTGCAGCATATCTGCTCTTTATGATATCTATTGGAGTTCTGTATTA TAAGAAAACAGAAAATCTTTCAGATTACATTTTAGGAGGTAGAAAGTTAAACAGCTGGGTTACTGCGCTGAGTGCCCAGG CATCGGATATGAGCGGCTGGCTATTGCTGGGGCTACCATGA
Upstream 100 bases:
>100_bases GAAAACGAGTTTAATTAAAAATATGTTTGGTTAAGAACGAGTTTAATTAAAAACGAAATTGATTAAAAAATAGGCTTTTG CTAAAAAATGGAGTTAAATC
Downstream 100 bases:
>100_bases TATGCTTACCTTTCAGGGATGGAATCCGTGTGGCTGGGTATAGGGCTGGCTGCAGGAACATATCTGAACTGGAAATTTGT CGCGAAAAAATTACGTCAAT
Product: sodium/proline symporter
Products: NA
Alternate protein names: Proline permease [H]
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MVPDNINIVVIFAAYLLFMISIGVLYYKKTENLSDYILGGRKLNSWVTALSAQASDMSGWLLLGLP
Sequences:
>Translated_66_residues MVPDNINIVVIFAAYLLFMISIGVLYYKKTENLSDYILGGRKLNSWVTALSAQASDMSGWLLLGLP >Mature_66_residues MVPDNINIVVIFAAYLLFMISIGVLYYKKTENLSDYILGGRKLNSWVTALSAQASDMSGWLLLGLP
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1787251, Length=59, Percent_Identity=59.3220338983051, Blast_Score=73, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 7310; Mature: 7310
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPDNINIVVIFAAYLLFMISIGVLYYKKTENLSDYILGGRKLNSWVTALSAQASDMSGW CCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCE LLLGLP EEEECC >Mature Secondary Structure MVPDNINIVVIFAAYLLFMISIGVLYYKKTENLSDYILGGRKLNSWVTALSAQASDMSGW CCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCE LLLGLP EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]