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The map label for this gene is 21227408

Identifier: 21227408

GI number: 21227408

Start: 1554338

End: 1555090

Strand: Reverse

Name: 21227408

Synonym: MM_1306

Alternate gene names: NA

Gene position: 1555090-1554338 (Counterclockwise)

Preceding gene: 21227413

Following gene: 21227402

Centisome position: 37.96

GC content: 48.07

Gene sequence:

>753_bases
ATGCAGATCGTTGAGATCGAACTTGACCCGGGCGAGGCTGTTCAGGCAGAAGCTGGAGCTATGGCATACATGGGGCCCGG
AATTCTAATGCAGACAGGTATGGGCAACGAAGGCGGAGGACTCTTTGGAGGCCTGAAAAAAGGCCTGAAAAGAGCTTTAA
CAGGCGAAAGCTTCTTTATTACAAGTTTTATTCATAAAGGCTCCGGAAAAGGGCACGTAGCTTTTGCAGCTCCTTACCCA
GGCAAAATTCTCCCACTTGACCTTTCCAAATTCGGAGGCAGTATTCTCTGCCAGAAGGATGCATTTCTCTGCGCTGCTAA
AGGTATTGAGGTGGAACTGGCTTTTACCCGCAAACTGGGTGCAGGGCTTTTCGGTGGTGAAGGCTTTATTCTCCAGAGAC
TGAGGGGTGACGGACTGGCTTTTATTCATATCGGAGGCACGGTTATAAGAAAAGATCTGGCTCCGGGTGAGACCTACAAG
GTTGATACCGGATGCGTAGCAGCTTTTACAGAAAATGTGACTTATGACATAACATGGTCCAGAGATTTCAAAAATGCGCT
CTTTGGTGGTGAAGGAGTAGTCCTTGCTACCCTGACAGGTCCAGGTACAGTGTACATGCAAAGTCTACCTTTCTCACGTC
TTGCTGACAGAATTTTTGCAGCTTCTGCTTACGGGCAAAACAGGGAAGAACGCAGTGGCATTGGTGGAAGTGACATACTT
GGAGGTCTTCTTGGAGGAGACAAATCCTTCTAA

Upstream 100 bases:

>100_bases
AAATATGTGACTTCTAATTTCTCCTGTAGTTTAATTTTAATGTAAATAAGGAGGCTACAAAATAGCTGACGATATCGACT
ACGAAATTATTGGCAATGAA

Downstream 100 bases:

>100_bases
AACGGAAACAATCCTAGCTAATAAAAATTATTAAAACTGATAATAGAAATAAAAACTGATAATGAATTTATAATTTCATA
AAGACCCGTAATCGGCAAAA

Product: HTH DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQIVEIELDPGEAVQAEAGAMAYMGPGILMQTGMGNEGGGLFGGLKKGLKRALTGESFFITSFIHKGSGKGHVAFAAPYP
GKILPLDLSKFGGSILCQKDAFLCAAKGIEVELAFTRKLGAGLFGGEGFILQRLRGDGLAFIHIGGTVIRKDLAPGETYK
VDTGCVAAFTENVTYDITWSRDFKNALFGGEGVVLATLTGPGTVYMQSLPFSRLADRIFAASAYGQNREERSGIGGSDIL
GGLLGGDKSF

Sequences:

>Translated_250_residues
MQIVEIELDPGEAVQAEAGAMAYMGPGILMQTGMGNEGGGLFGGLKKGLKRALTGESFFITSFIHKGSGKGHVAFAAPYP
GKILPLDLSKFGGSILCQKDAFLCAAKGIEVELAFTRKLGAGLFGGEGFILQRLRGDGLAFIHIGGTVIRKDLAPGETYK
VDTGCVAAFTENVTYDITWSRDFKNALFGGEGVVLATLTGPGTVYMQSLPFSRLADRIFAASAYGQNREERSGIGGSDIL
GGLLGGDKSF
>Mature_250_residues
MQIVEIELDPGEAVQAEAGAMAYMGPGILMQTGMGNEGGGLFGGLKKGLKRALTGESFFITSFIHKGSGKGHVAFAAPYP
GKILPLDLSKFGGSILCQKDAFLCAAKGIEVELAFTRKLGAGLFGGEGFILQRLRGDGLAFIHIGGTVIRKDLAPGETYK
VDTGCVAAFTENVTYDITWSRDFKNALFGGEGVVLATLTGPGTVYMQSLPFSRLADRIFAASAYGQNREERSGIGGSDIL
GGLLGGDKSF

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 26172; Mature: 26172

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVEIELDPGEAVQAEAGAMAYMGPGILMQTGMGNEGGGLFGGLKKGLKRALTGESFFI
CEEEEEEECCCCCCHHCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE
TSFIHKGSGKGHVAFAAPYPGKILPLDLSKFGGSILCQKDAFLCAAKGIEVELAFTRKLG
EEEECCCCCCCEEEEECCCCCCEEEEEHHHCCCEEEEECCCEEEEECCCEEEEEEEECCC
AGLFGGEGFILQRLRGDGLAFIHIGGTVIRKDLAPGETYKVDTGCVAAFTENVTYDITWS
CCEECCCCCEEEEECCCCEEEEEECCEEEEECCCCCCEEEECCCEEEEEECCEEEEEEEC
RDFKNALFGGEGVVLATLTGPGTVYMQSLPFSRLADRIFAASAYGQNREERSGIGGSDIL
CCHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHH
GGLLGGDKSF
HHHCCCCCCC
>Mature Secondary Structure
MQIVEIELDPGEAVQAEAGAMAYMGPGILMQTGMGNEGGGLFGGLKKGLKRALTGESFFI
CEEEEEEECCCCCCHHCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE
TSFIHKGSGKGHVAFAAPYPGKILPLDLSKFGGSILCQKDAFLCAAKGIEVELAFTRKLG
EEEECCCCCCCEEEEECCCCCCEEEEEHHHCCCEEEEECCCEEEEECCCEEEEEEEECCC
AGLFGGEGFILQRLRGDGLAFIHIGGTVIRKDLAPGETYKVDTGCVAAFTENVTYDITWS
CCEECCCCCEEEEECCCCEEEEEECCEEEEECCCCCCEEEECCCEEEEEECCEEEEEEEC
RDFKNALFGGEGVVLATLTGPGTVYMQSLPFSRLADRIFAASAYGQNREERSGIGGSDIL
CCHHHHHCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHH
GGLLGGDKSF
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA