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The map label for this gene is 21227397

Identifier: 21227397

GI number: 21227397

Start: 1537324

End: 1538928

Strand: Reverse

Name: 21227397

Synonym: MM_1295

Alternate gene names: NA

Gene position: 1538928-1537324 (Counterclockwise)

Preceding gene: 21227400

Following gene: 21227396

Centisome position: 37.57

GC content: 45.61

Gene sequence:

>1605_bases
ATGATAAATCGTTATAATAATTCTGGGAGAATTCACATGCAAAATACTGATACAACAAAATACATTATTCACTCTAAAAT
CAATGCTGATGGGGTTATTGAGCGTCCGGATATCGTAGGCGCAATTTTTGGTCAGACTGAAGGTCTTCTTGGAGCTGACC
TTGATCTGCGTGATTTGCAGAAAACCGGAAGGATCGGAAGGATTGAGGTAATGGTCACTGCTAAAGGTGGAAAAACCAAA
GGAAATATCTTCGTTCCTTCTAGCCTTGATAAAGTAGAGACATCAATTCTTGCAGCATCGCTGGAAACCATTGACAGGGT
AGGTCCCTGCAGTGCCAAGATAGAGGTTTTCCAGGTAGAAGATGTCAGGGCTGTAAAACGCAAAAAAATCATTGAGAGGG
CAAAACTCATTTTTACGAAAATGTTCGATGAGACTGTGCCCGAATCTCAGGAACTTGCCGATGAAGTAAGACAGTCTGTA
AGGGTTGATGAGCTGACCTATTATGGCAAGTCAAGAATACCCTGCGGGCCGAATGTGCTTAACTCGGACGCTATTATTAT
TCTCGAGGGCAGGGCTGATATCCTGAACCTCCTCCGTTATGGGATTAAAAATACCATCTGCGTTGGTGGAACCAACATTC
CTCCTGAGGTTGCCGAACTTACTAAAAAGAAAACAGTAACCGCTTTTACGGATGGTGACCGTGGCGGAGAACTCATTATA
CGTGAACTTTTGCAGGTAGCAGACATCGACTATGTTGCCCGTGCGCCGGATGGCAAATGTGTGGAAGACCTGGTCCAGAA
AGAAATTATCAGAGCTCTCCGCCGCAAGGTTCCGGTGGAACAGATCATTGAGAAATACGGGATTCAGGAAAGAGAAAATG
AAGACAGCGCATGCAGGCTGGAACGTGTTTCTAAAAGAAAGATCAGAGCTCCGGAAATTGTTCCCAGGATTGCTGAGAAG
AAGCTGCATAAGCGTGTGAAGGTTCACAGGGTATCTCCAAAAGCAGACATCCATGAAGAGGAGTTCCCTGAAGAAATGGA
AGAAACCGGCCCTGAAAGAGCTCCGGAAAAAATTTTCGAAAAGGTCACTGAAAGAATTCCAGAAAGGCCTGCTGAAAAAA
CTTCTGCTGCGGCAGAAAGAGTTGAGGCAAGAACCTCTGTTGCAAAGCCTGCGGTTATGGCAAGGGCAGTTCCTGCTACC
AGAGTCACCAGAGGAAAAGCTGCGGCTGAAAAAGGCCCGGCTGTAAAGGTTCCTGGAGGAGAGGCGGTTAGGGTTTCCCC
GGCTCCGGCAAGACAGGCCCCGGCTCCGGTTTCTCCGGAAGCTATAAGGTTCAGGCCTCACGTTGATGCTCTTAAAGGTA
CTTTGACTGCAAGGATTCTTGACTCCGATGATAAGGTTATAGAAGAAATCGCAGTAAGAGACCTTGCAAGCAGGCTAAAG
AACTACAGGGATAATGTGAAAAGTGTAGTTTTTGATGGCGTGATCACACAGAGGCTCGTTGATATCGCTTCTAGCAATGA
AATCAAAAACCTTATAGGAGTAAAAATAGGAAATATCGCTAAAGTTCCTGCAGATATGGAAGTTTTGACCTCAAGCATGC
TCTGA

Upstream 100 bases:

>100_bases
GGAAAAAGAATTGTACACCAGGTTCCCCCGTGTACAGAGACTATTTCCTGTCTATTTGCCAGAAAATTGCCAGAGAAAAA
ACCTTTCATAATAATACTTC

Downstream 100 bases:

>100_bases
GAGGCTTTTTAACTTCCTTTTTTCTTTCCTTTTCCTTATTTTTGTATTTTATTTCTCCATTTTTCTATTCTTTCATTTTC
CCGTTCTTTTGTTCCATTCT

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MINRYNNSGRIHMQNTDTTKYIIHSKINADGVIERPDIVGAIFGQTEGLLGADLDLRDLQKTGRIGRIEVMVTAKGGKTK
GNIFVPSSLDKVETSILAASLETIDRVGPCSAKIEVFQVEDVRAVKRKKIIERAKLIFTKMFDETVPESQELADEVRQSV
RVDELTYYGKSRIPCGPNVLNSDAIIILEGRADILNLLRYGIKNTICVGGTNIPPEVAELTKKKTVTAFTDGDRGGELII
RELLQVADIDYVARAPDGKCVEDLVQKEIIRALRRKVPVEQIIEKYGIQERENEDSACRLERVSKRKIRAPEIVPRIAEK
KLHKRVKVHRVSPKADIHEEEFPEEMEETGPERAPEKIFEKVTERIPERPAEKTSAAAERVEARTSVAKPAVMARAVPAT
RVTRGKAAAEKGPAVKVPGGEAVRVSPAPARQAPAPVSPEAIRFRPHVDALKGTLTARILDSDDKVIEEIAVRDLASRLK
NYRDNVKSVVFDGVITQRLVDIASSNEIKNLIGVKIGNIAKVPADMEVLTSSML

Sequences:

>Translated_534_residues
MINRYNNSGRIHMQNTDTTKYIIHSKINADGVIERPDIVGAIFGQTEGLLGADLDLRDLQKTGRIGRIEVMVTAKGGKTK
GNIFVPSSLDKVETSILAASLETIDRVGPCSAKIEVFQVEDVRAVKRKKIIERAKLIFTKMFDETVPESQELADEVRQSV
RVDELTYYGKSRIPCGPNVLNSDAIIILEGRADILNLLRYGIKNTICVGGTNIPPEVAELTKKKTVTAFTDGDRGGELII
RELLQVADIDYVARAPDGKCVEDLVQKEIIRALRRKVPVEQIIEKYGIQERENEDSACRLERVSKRKIRAPEIVPRIAEK
KLHKRVKVHRVSPKADIHEEEFPEEMEETGPERAPEKIFEKVTERIPERPAEKTSAAAERVEARTSVAKPAVMARAVPAT
RVTRGKAAAEKGPAVKVPGGEAVRVSPAPARQAPAPVSPEAIRFRPHVDALKGTLTARILDSDDKVIEEIAVRDLASRLK
NYRDNVKSVVFDGVITQRLVDIASSNEIKNLIGVKIGNIAKVPADMEVLTSSML
>Mature_534_residues
MINRYNNSGRIHMQNTDTTKYIIHSKINADGVIERPDIVGAIFGQTEGLLGADLDLRDLQKTGRIGRIEVMVTAKGGKTK
GNIFVPSSLDKVETSILAASLETIDRVGPCSAKIEVFQVEDVRAVKRKKIIERAKLIFTKMFDETVPESQELADEVRQSV
RVDELTYYGKSRIPCGPNVLNSDAIIILEGRADILNLLRYGIKNTICVGGTNIPPEVAELTKKKTVTAFTDGDRGGELII
RELLQVADIDYVARAPDGKCVEDLVQKEIIRALRRKVPVEQIIEKYGIQERENEDSACRLERVSKRKIRAPEIVPRIAEK
KLHKRVKVHRVSPKADIHEEEFPEEMEETGPERAPEKIFEKVTERIPERPAEKTSAAAERVEARTSVAKPAVMARAVPAT
RVTRGKAAAEKGPAVKVPGGEAVRVSPAPARQAPAPVSPEAIRFRPHVDALKGTLTARILDSDDKVIEEIAVRDLASRLK
NYRDNVKSVVFDGVITQRLVDIASSNEIKNLIGVKIGNIAKVPADMEVLTSSML

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171
- InterPro:   IPR020607 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 59019; Mature: 59019

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRYNNSGRIHMQNTDTTKYIIHSKINADGVIERPDIVGAIFGQTEGLLGADLDLRDLQ
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCHHHHHHCCCCCCCCCCCCHHHHH
KTGRIGRIEVMVTAKGGKTKGNIFVPSSLDKVETSILAASLETIDRVGPCSAKIEVFQVE
HCCCCEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH
DVRAVKRKKIIERAKLIFTKMFDETVPESQELADEVRQSVRVDELTYYGKSRIPCGPNVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCC
NSDAIIILEGRADILNLLRYGIKNTICVGGTNIPPEVAELTKKKTVTAFTDGDRGGELII
CCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCEEEEECCCCCCHHHHH
RELLQVADIDYVARAPDGKCVEDLVQKEIIRALRRKVPVEQIIEKYGIQERENEDSACRL
HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH
ERVSKRKIRAPEIVPRIAEKKLHKRVKVHRVSPKADIHEEEFPEEMEETGPERAPEKIFE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCHHHHHHCCCCCCHHHHHH
KVTERIPERPAEKTSAAAERVEARTSVAKPAVMARAVPATRVTRGKAAAEKGPAVKVPGG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCEEECCCC
EAVRVSPAPARQAPAPVSPEAIRFRPHVDALKGTLTARILDSDDKVIEEIAVRDLASRLK
CEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHH
NYRDNVKSVVFDGVITQRLVDIASSNEIKNLIGVKIGNIAKVPADMEVLTSSML
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEECCEECCCCHHHHHHHHCC
>Mature Secondary Structure
MINRYNNSGRIHMQNTDTTKYIIHSKINADGVIERPDIVGAIFGQTEGLLGADLDLRDLQ
CCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEECCCHHHHHHCCCCCCCCCCCCHHHHH
KTGRIGRIEVMVTAKGGKTKGNIFVPSSLDKVETSILAASLETIDRVGPCSAKIEVFQVE
HCCCCEEEEEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH
DVRAVKRKKIIERAKLIFTKMFDETVPESQELADEVRQSVRVDELTYYGKSRIPCGPNVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCC
NSDAIIILEGRADILNLLRYGIKNTICVGGTNIPPEVAELTKKKTVTAFTDGDRGGELII
CCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCEEEEECCCCCCHHHHH
RELLQVADIDYVARAPDGKCVEDLVQKEIIRALRRKVPVEQIIEKYGIQERENEDSACRL
HHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH
ERVSKRKIRAPEIVPRIAEKKLHKRVKVHRVSPKADIHEEEFPEEMEETGPERAPEKIFE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCHHHHHHCCCCCCHHHHHH
KVTERIPERPAEKTSAAAERVEARTSVAKPAVMARAVPATRVTRGKAAAEKGPAVKVPGG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCCEEECCCC
EAVRVSPAPARQAPAPVSPEAIRFRPHVDALKGTLTARILDSDDKVIEEIAVRDLASRLK
CEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHH
NYRDNVKSVVFDGVITQRLVDIASSNEIKNLIGVKIGNIAKVPADMEVLTSSML
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEECCEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]