Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227359

Identifier: 21227359

GI number: 21227359

Start: 1492863

End: 1493555

Strand: Reverse

Name: 21227359

Synonym: MM_1257

Alternate gene names: NA

Gene position: 1493555-1492863 (Counterclockwise)

Preceding gene: 21227360

Following gene: 21227358

Centisome position: 36.46

GC content: 44.44

Gene sequence:

>693_bases
ATGGACCCAGCAAAATTACTTGACATCCTGGGGAATGAAAACCGCAGGAAGATAATTCAGCTTCTTGCAAACCGCCCCTG
CTATGTCAGTGAGATTTCAGGCAGGCTGGGGGTAGGACCAAAGGCGATTATCAGTCACCTTAGCCTGTTAGAACAGGCAG
GGCTGATCGAGTGCAGTGTGGACGAGCAAAGGCGCAAATATTTCAATATTGCAAATAATGTGCGGCTTGAGGTATCTGTA
TCACCTTATTCATATACGATGGCTCTTCAGGACATCAACTTCGACAGGGAGAAAAAACGGGAAAGTTATGCTGTCGAAAA
TAATGGACCTGCTACCAGAGATGAATCATCCTGCTTCTTCCTGAAGCTGAGCGAAAGGCTCCGTGAACTTAGAATAAAAC
AGGAAGAGCTTGCACAGATGCAGAAACAACTTCAGGCTGAATATACGGAATTGATGGATAAATGCCTGGATTCCATCGAG
GATATTGCCAGAAACCCTGTAGAATGTGAGCTTCTGTTCGAGCTTTTGAAAAACGAGGCTACAGCGGCAGTCCTTTGCTA
TAACCTGCGTCTGCATCCCAGCATTATAAACTCTAACCTTATGGATCTTGCAGAAAGAGGCTTTGTTGAGTATACGATCA
AAAATAGCCAGCAGTACTGGAAAATATGTGAGACCGGAGTTGAAAATAAATGA

Upstream 100 bases:

>100_bases
AAATTACATAAAAACAGAACCGTAAACTCATCATTAATTAACTCATCATTAATTAATAGTAATTTCAATAGTAAATTTCA
GCGATCACCAGAGGGGGAAA

Downstream 100 bases:

>100_bases
CTGAAGAAATTAATTTGAGAGTAGCTGAGGCTTATCATAAAGACGTGGGAAGGGGAATTGCAAGAATCGACACCCGTTTA
ATGCAGGAAATGGGACTTGT

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator MarR Family; Transcriptional Regulator Arsr Family; Regulatory Protein ArsR; Transcription Regulator; Archaeal Heat Shock Regulator ArsR Family; Conditioned Medium-Induced; Archaeal Heat Shock Regulator; Hth5 Family Protein; ArS Family Heat Shock Protein; Heat Shock Regulator; Transcriptional Regulator TrmB

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV
SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE
DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK

Sequences:

>Translated_230_residues
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV
SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE
DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK
>Mature_230_residues
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSVDEQRRKYFNIANNVRLEVSV
SPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFFLKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIE
DIARNPVECELLFELLKNEATAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK

Specific function: Unknown

COG id: COG1777

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26501; Mature: 26501

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSV
CCHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCEEECC
DEQRRKYFNIANNVRLEVSVSPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFF
CHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEE
LKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIEDIARNPVECELLFELLKNEA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK
CEEEEEEECEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MDPAKLLDILGNENRRKIIQLLANRPCYVSEISGRLGVGPKAIISHLSLLEQAGLIECSV
CCHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCEEECC
DEQRRKYFNIANNVRLEVSVSPYSYTMALQDINFDREKKRESYAVENNGPATRDESSCFF
CHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEE
LKLSERLRELRIKQEELAQMQKQLQAEYTELMDKCLDSIEDIARNPVECELLFELLKNEA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
TAAVLCYNLRLHPSIINSNLMDLAERGFVEYTIKNSQQYWKICETGVENK
CEEEEEEECEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA