Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227326

Identifier: 21227326

GI number: 21227326

Start: 1449674

End: 1451107

Strand: Reverse

Name: 21227326

Synonym: MM_1224

Alternate gene names: NA

Gene position: 1451107-1449674 (Counterclockwise)

Preceding gene: 21227331

Following gene: 21227323

Centisome position: 35.42

GC content: 45.12

Gene sequence:

>1434_bases
ATGGCTATGAAACCCAGAATTGCAGAATCTCCTCAGGTTCGTTTGATTGACCTCAAGTCAAAACCATTCTTTATAGTAGC
TTCGGTAGAAGTAGGAAATACCACAACCAAATGTATCCTTACAGCCACCAATCTGGATACTGGCAGGACGCACATCATAA
ATAAAGTCGTGCGTATGACCAGAGATGTCCGTCCTCCAAAACCCGGAGAAGCTGTATTTGGAAAAACACTTACTGGTGTA
GAACTTACACGCGAGGCTGTTGCAGAACTTGTTAAGAATACACTTACAGAATCCGTTGAAAAAGCCAGTCTGGACATAAA
GACTGACCTTAATTTTGTTGTTCGCTCTACTGGTGTCGTTGCAGGCTTTGATTCTCCTGAAGAAGTCGGCGAATTTATTA
AAGCACTGGCAGATGGGTGTCTTATGGCTGGTGTTCCTCCAAGAAATATGACTGCTCCAATGTCCATTTCAAATATCCCT
AAAAAATTCCAGAAATACAGTAAACTGGAGAAAGTTATTTTTGATGGGGCAGTTGCCGGGGTTGTGCCCCCAATAGGCTC
TACGGGAGTTGAAATTGTCGCAAACGAGATGGAAGGTGAACTTGCAACTGCAGGAATAAAGGAAGCGGCTAAATTGACAG
ATGTGGATTTCAGGAACCCCTGCATCTCAATTGACTTCGGGACCACCCTTGACGGCAGGATAACAAGTTCTGACCAGCCT
TATGCAAAAACAATTGGTAATTTCTGCGGATATGCAGGCGCAATTCCGGACGCCATAATTCGGGGCTCAAAGGTCGTTGA
TTCGAAAGTAGGAACTGCTCTGGAAGTTTTTGAAAAACAGAAACCGCCTTCTTTCATTACTTTGAAAATGAAAGCTAAAT
CCATAGAAGAGTATTCAAGGCGTATTCATGAGCTGATAACTATTGAAAAAGTCCCCAGGGATAGAAAGAGATACGGCAGT
GTCCCTGTCAGACCCGACGCGGCTGAAGAGATAGGCGTAATACTTATAGGCTGCGATGTGGGTGAGAATGGCTCAAATAT
GGGAAAACTGAGTGCAATAGGCATGGAAGTCTGTAAAAGCCATGGATTATCGATTGTTTATGCAGTCATTGATGAGGTGA
TGGCAGGAGTGGTGTGCAGGCTCATAGAGGTTGCAAAGAAAGAAGGCCTTATTTTTGAAGACAGCACTTTCGGAGTTACA
GGCAGGGCAGGAATTACCGGGAACAAACCTAAACTGATTTTGAACTGCCTGGAGAAAATGAATCTCGCCCCCAAGATTGA
TGAGAGAGTGGTCTTTGTCGACGATGGGCTTGCCAGAGGCGCAGCTGTTATGGCACGCTGCATGAACTCTCTGGGAACCC
CACAAAATCCGCTTGGTGGCAGGCACGGTGGGAAATGTATCCTTGCCCAGCGGATCAAAATGCAGGAAAAATGA

Upstream 100 bases:

>100_bases
TGTGTTCCAATACAAATACATTAATTTTCAGTTGCAGGTTCAATAGTATAAGATGCGGATCCAATTCAGTCTATAATAGA
TCCTCAGGAAGGGAAAAAAA

Downstream 100 bases:

>100_bases
AAGGATAGCCCAGGTGAAATGGTAGTGTCTACAGCAAACTGCCTTTTCTCTTAATATAGCTCACATAAACAAAAGAAATA
GCTGTTTAAAGGCAGGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAMKPRIAESPQVRLIDLKSKPFFIVASVEVGNTTTKCILTATNLDTGRTHIINKVVRMTRDVRPPKPGEAVFGKTLTGV
ELTREAVAELVKNTLTESVEKASLDIKTDLNFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRNMTAPMSISNIP
KKFQKYSKLEKVIFDGAVAGVVPPIGSTGVEIVANEMEGELATAGIKEAAKLTDVDFRNPCISIDFGTTLDGRITSSDQP
YAKTIGNFCGYAGAIPDAIIRGSKVVDSKVGTALEVFEKQKPPSFITLKMKAKSIEEYSRRIHELITIEKVPRDRKRYGS
VPVRPDAAEEIGVILIGCDVGENGSNMGKLSAIGMEVCKSHGLSIVYAVIDEVMAGVVCRLIEVAKKEGLIFEDSTFGVT
GRAGITGNKPKLILNCLEKMNLAPKIDERVVFVDDGLARGAAVMARCMNSLGTPQNPLGGRHGGKCILAQRIKMQEK

Sequences:

>Translated_477_residues
MAMKPRIAESPQVRLIDLKSKPFFIVASVEVGNTTTKCILTATNLDTGRTHIINKVVRMTRDVRPPKPGEAVFGKTLTGV
ELTREAVAELVKNTLTESVEKASLDIKTDLNFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRNMTAPMSISNIP
KKFQKYSKLEKVIFDGAVAGVVPPIGSTGVEIVANEMEGELATAGIKEAAKLTDVDFRNPCISIDFGTTLDGRITSSDQP
YAKTIGNFCGYAGAIPDAIIRGSKVVDSKVGTALEVFEKQKPPSFITLKMKAKSIEEYSRRIHELITIEKVPRDRKRYGS
VPVRPDAAEEIGVILIGCDVGENGSNMGKLSAIGMEVCKSHGLSIVYAVIDEVMAGVVCRLIEVAKKEGLIFEDSTFGVT
GRAGITGNKPKLILNCLEKMNLAPKIDERVVFVDDGLARGAAVMARCMNSLGTPQNPLGGRHGGKCILAQRIKMQEK
>Mature_476_residues
AMKPRIAESPQVRLIDLKSKPFFIVASVEVGNTTTKCILTATNLDTGRTHIINKVVRMTRDVRPPKPGEAVFGKTLTGVE
LTREAVAELVKNTLTESVEKASLDIKTDLNFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRNMTAPMSISNIPK
KFQKYSKLEKVIFDGAVAGVVPPIGSTGVEIVANEMEGELATAGIKEAAKLTDVDFRNPCISIDFGTTLDGRITSSDQPY
AKTIGNFCGYAGAIPDAIIRGSKVVDSKVGTALEVFEKQKPPSFITLKMKAKSIEEYSRRIHELITIEKVPRDRKRYGSV
PVRPDAAEEIGVILIGCDVGENGSNMGKLSAIGMEVCKSHGLSIVYAVIDEVMAGVVCRLIEVAKKEGLIFEDSTFGVTG
RAGITGNKPKLILNCLEKMNLAPKIDERVVFVDDGLARGAAVMARCMNSLGTPQNPLGGRHGGKCILAQRIKMQEK

Specific function: Unknown

COG id: COG4065

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1153 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008303 [H]

Pfam domain/function: PF09887 DUF2114 [H]

EC number: NA

Molecular weight: Translated: 51279; Mature: 51148

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKPRIAESPQVRLIDLKSKPFFIVASVEVGNTTTKCILTATNLDTGRTHIINKVVRMT
CCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHH
RDVRPPKPGEAVFGKTLTGVELTREAVAELVKNTLTESVEKASLDIKTDLNFVVRSTGVV
HCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCEE
AGFDSPEEVGEFIKALADGCLMAGVPPRNMTAPMSISNIPKKFQKYSKLEKVIFDGAVAG
ECCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
VVPPIGSTGVEIVANEMEGELATAGIKEAAKLTDVDFRNPCISIDFGTTLDGRITSSDQP
CCCCCCCCCHHEEEHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECCCCCC
YAKTIGNFCGYAGAIPDAIIRGSKVVDSKVGTALEVFEKQKPPSFITLKMKAKSIEEYSR
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH
RIHELITIEKVPRDRKRYGSVPVRPDAAEEIGVILIGCDVGENGSNMGKLSAIGMEVCKS
HHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
HGLSIVYAVIDEVMAGVVCRLIEVAKKEGLIFEDSTFGVTGRAGITGNKPKLILNCLEKM
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHC
NLAPKIDERVVFVDDGLARGAAVMARCMNSLGTPQNPLGGRHGGKCILAQRIKMQEK
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCC
>Mature Secondary Structure 
AMKPRIAESPQVRLIDLKSKPFFIVASVEVGNTTTKCILTATNLDTGRTHIINKVVRMT
CCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHH
RDVRPPKPGEAVFGKTLTGVELTREAVAELVKNTLTESVEKASLDIKTDLNFVVRSTGVV
HCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCEE
AGFDSPEEVGEFIKALADGCLMAGVPPRNMTAPMSISNIPKKFQKYSKLEKVIFDGAVAG
ECCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
VVPPIGSTGVEIVANEMEGELATAGIKEAAKLTDVDFRNPCISIDFGTTLDGRITSSDQP
CCCCCCCCCHHEEEHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEECCCCCC
YAKTIGNFCGYAGAIPDAIIRGSKVVDSKVGTALEVFEKQKPPSFITLKMKAKSIEEYSR
HHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH
RIHELITIEKVPRDRKRYGSVPVRPDAAEEIGVILIGCDVGENGSNMGKLSAIGMEVCKS
HHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
HGLSIVYAVIDEVMAGVVCRLIEVAKKEGLIFEDSTFGVTGRAGITGNKPKLILNCLEKM
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHC
NLAPKIDERVVFVDDGLARGAAVMARCMNSLGTPQNPLGGRHGGKCILAQRIKMQEK
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]