Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227301

Identifier: 21227301

GI number: 21227301

Start: 1425436

End: 1425777

Strand: Direct

Name: 21227301

Synonym: MM_1199

Alternate gene names: NA

Gene position: 1425436-1425777 (Clockwise)

Preceding gene: 21227299

Following gene: 21227302

Centisome position: 34.8

GC content: 40.35

Gene sequence:

>342_bases
ATGTACCTGGAAATTGCAATGCTTGCCTATTTTGTAGTCTTATTCCTGACAATCCGGGATATCCGGATTTTTAAAAGGAC
AGGCTATATTTCTTACAGGAAAGGTGCCCTGAAAGGGCTTGCAGCTTCTTCCCTGATTCTTATAGGGGCGATTAGCATTG
AAGCAAAACCAGAAATTGGTCTGCTTATTGTATTATTAGGACTTTATATCAACCGTAAAGGAGTAAGAGAGCCTGTTTTC
ACAAATGCCGGAACTCTTGACCGTTTTCTTGGGAAAACTGATTACAGGAGGGCTAATAGGTTAAGGAAAAATGGTCAGAA
GGCAGCTCCTGATAGAAAATAA

Upstream 100 bases:

>100_bases
TTTAAACCTGTTATCCTGATTTATCCGATTATAGAGAAATATTCTGGAAAATAGGCATTTAAAGTAGCAGGAAATGCAAA
ACCAAAAATTGGAGAAAAGA

Downstream 100 bases:

>100_bases
AGATAAAATAAAGATAAAATGAAGCAGCCAGTACCGAAGAAAGAAAGGTTAAGATGGATAAAAAGAGAAAAAAATATCTG
GAGAAAAGGCAGGAGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MYLEIAMLAYFVVLFLTIRDIRIFKRTGYISYRKGALKGLAASSLILIGAISIEAKPEIGLLIVLLGLYINRKGVREPVF
TNAGTLDRFLGKTDYRRANRLRKNGQKAAPDRK

Sequences:

>Translated_113_residues
MYLEIAMLAYFVVLFLTIRDIRIFKRTGYISYRKGALKGLAASSLILIGAISIEAKPEIGLLIVLLGLYINRKGVREPVF
TNAGTLDRFLGKTDYRRANRLRKNGQKAAPDRK
>Mature_113_residues
MYLEIAMLAYFVVLFLTIRDIRIFKRTGYISYRKGALKGLAASSLILIGAISIEAKPEIGLLIVLLGLYINRKGVREPVF
TNAGTLDRFLGKTDYRRANRLRKNGQKAAPDRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12746; Mature: 12746

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLEIAMLAYFVVLFLTIRDIRIFKRTGYISYRKGALKGLAASSLILIGAISIEAKPEIG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHEEEEEEEECCCCCCHH
LLIVLLGLYINRKGVREPVFTNAGTLDRFLGKTDYRRANRLRKNGQKAAPDRK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYLEIAMLAYFVVLFLTIRDIRIFKRTGYISYRKGALKGLAASSLILIGAISIEAKPEIG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHEEEEEEEECCCCCCHH
LLIVLLGLYINRKGVREPVFTNAGTLDRFLGKTDYRRANRLRKNGQKAAPDRK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA