| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227298
Identifier: 21227298
GI number: 21227298
Start: 1421632
End: 1422468
Strand: Direct
Name: 21227298
Synonym: MM_1196
Alternate gene names: NA
Gene position: 1421632-1422468 (Clockwise)
Preceding gene: 21227297
Following gene: 21227299
Centisome position: 34.7
GC content: 42.41
Gene sequence:
>837_bases TTGAACAGGACTGGATTAAAGCTCCTTTTCTGCTTATTAATCACACTTTCTCTCTTTTTCGGGTGTCTGACTCATTCTGC AAATGCTGAGATAGTAGAGTGGGGAGTAACCCCTGAAAACCCGGAGAAAGGGGATACAATAATAATCAGCGGACTTGCCT CACCTGAAGAAGAGGTGGGAGTTTCAATTTCTTTTGAAAAGACAATTCCAGTTTACCTTGGAGAGTACACTTACGAGTTA GAAAACATCGAGGTTCTCAATTTTAATAATCTCTTAACTATAAGGACAGAAGGAGTAGAGAGCCTTAAAGTAAAAATGAA AATGGTTCTCTCAAAAACAGAAGCTACCCGGGCGGAAGATGGGACCGCTACCGTGTCCTTTTCCGGGGTATCTCCTGGAA AGTATAAGATAAGGGTAGAAGGCGCGGCAGAAGAAGGAGCCTCGGGTGTTAACCTGAAGGTTACATCAGTCCAGAAATTG AAAGCTGGAAAAGACGGAAAATTCAATTATATATACAGAACGGAGTCGGTTCCTTCAGGCAAGCTTGAGGTCAGAGTGGG AAATTCGGAAAGGGAAATCATACTTGATGCAAAAGAAAAAACCCCTGAACCTGTGAACGTGGAAAATGAGGAAAAACGCA GCATTTACCTGGCTGAAAGTTCATGGGACGAAGATAATTCTGAGGCTGCAATTGCAGGAGAAGTCCCTTCAAAAGGGCTT GAAAAAGAGCAAAAAAATCAGGGACATTACAACAACCAGGCCTCCAATTTCTTTTATCTGCTTGCCGGAGCCCTGGCAGG ATTCGGATGTTTACAGGTAATTAAAAGAAAAAAGTAA
Upstream 100 bases:
>100_bases TGAGAAAATAAAAAAAGCCGTGCTGAGCAGATTATACAAATTAAACAAACTGGCGAAGGTTAAACCGGGGAGGGAATTTA TGGGATCCGAGCTGCTCAAA
Downstream 100 bases:
>100_bases AAATATTTTTATCCCCTGCTGCCCCTGTGCCCCGCAGATTATATAAAACACTGCTTTCTTTAAAGGAAAGCAAAATGTTT TATTAACAGGATTCAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK
Sequences:
>Translated_278_residues MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK >Mature_278_residues MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30512; Mature: 30512
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHC VSISFEKTIPVYLGEYTYELENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAED EEEEECCCCCEEECCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC GTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKLKAGKDGKFNYIYRTESVPSG CEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCCC KLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL EEEEEECCCCCEEEEECHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHC VSISFEKTIPVYLGEYTYELENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAED EEEEECCCCCEEECCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC GTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKLKAGKDGKFNYIYRTESVPSG CEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCCC KLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL EEEEEECCCCCEEEEECHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA