| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227291
Identifier: 21227291
GI number: 21227291
Start: 1413683
End: 1414507
Strand: Direct
Name: 21227291
Synonym: MM_1189
Alternate gene names: NA
Gene position: 1413683-1414507 (Clockwise)
Preceding gene: 21227288
Following gene: 21227292
Centisome position: 34.51
GC content: 43.39
Gene sequence:
>825_bases TTGATTCTGGCTCTACTGACAATTTTACCTGCAGCTGCCGCGGTTGACAGCTGGGAAATATCCCCCGAGAACCCCACTCT TGGAGACACCCTTAGAATCAAGGGAAGCGCTTCTCCGGAAGAGGAGGTTGAAATACAGGTAAGCTTTGAAAAGGATGTTC AGGCATCCGGAGGGGAGTATGAGTACATACTCGAAGACGTCAAAATTCCGGACGGGTTCAATAACCGCTTTACAGTACAG GCAAGTGATGCCAGAAACCTCAATGTCAGAGTAAAAATGCTAATCTGGATAACCAAGAGTTCAGAAGCTTCCGGTAACAT CGCAACTGTAACGCAGTCAAGTGTCCCTCCAGGAACCTATCAGATAAAAATGGATGGAGACGCTAAAAATGGAGATTCAA CGGTGAACCTGAAAATTACTGCTGTTCAGAGGATAAAAGCAGATTCAGGAGGGGACTTCAGTTATTCATATAATACAAAA GCAGTCCCCCCGGGAGACTTTAAGGTAAGTGTGGGAGGCACTACTCGAAAAGTAACCCTCAAGGGAAAAACCTTAGCTAT AACACCTGCCCATCCATTAGAAGAAATAGAAACTGTCACGGAAAAGAATTCATCGGAAATCCGGGAAAAAATGGAAAATA ATACTGAAGCAGTCTTGAACTCGGATCAGGACAGTGAAAACGTAGAACATGAAGAAGTTCATAAGTCTCAACCTGTGAAA CCTCAGCCTGTTGAAAAATCAGGGCTTCCCGTAGATACGGTTTACATGCTGGGAGGTATGGTAGCAGCATTATTAATTCT TATTTTGTATTCAAAGAGAAAATAA
Upstream 100 bases:
>100_bases AGTATACCCGAATTTTAAAGGAGTAGTTCCCGTGATAAAATCAGCTCATCCCCATAAAAGGCTAAAAGAACATCTCTTTA TAACTGTCTCTTTTTCGGTT
Downstream 100 bases:
>100_bases AACAAGATGAATTATTTCAGCCGGATTGAATGAAAAGATTTGCTATCCTGAGCTGATTAACCAGAAATTCAATGGGGAAA ATGGAGGCATGTAATTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MILALLTILPAAAAVDSWEISPENPTLGDTLRIKGSASPEEEVEIQVSFEKDVQASGGEYEYILEDVKIPDGFNNRFTVQ ASDARNLNVRVKMLIWITKSSEASGNIATVTQSSVPPGTYQIKMDGDAKNGDSTVNLKITAVQRIKADSGGDFSYSYNTK AVPPGDFKVSVGGTTRKVTLKGKTLAITPAHPLEEIETVTEKNSSEIREKMENNTEAVLNSDQDSENVEHEEVHKSQPVK PQPVEKSGLPVDTVYMLGGMVAALLILILYSKRK
Sequences:
>Translated_274_residues MILALLTILPAAAAVDSWEISPENPTLGDTLRIKGSASPEEEVEIQVSFEKDVQASGGEYEYILEDVKIPDGFNNRFTVQ ASDARNLNVRVKMLIWITKSSEASGNIATVTQSSVPPGTYQIKMDGDAKNGDSTVNLKITAVQRIKADSGGDFSYSYNTK AVPPGDFKVSVGGTTRKVTLKGKTLAITPAHPLEEIETVTEKNSSEIREKMENNTEAVLNSDQDSENVEHEEVHKSQPVK PQPVEKSGLPVDTVYMLGGMVAALLILILYSKRK >Mature_274_residues MILALLTILPAAAAVDSWEISPENPTLGDTLRIKGSASPEEEVEIQVSFEKDVQASGGEYEYILEDVKIPDGFNNRFTVQ ASDARNLNVRVKMLIWITKSSEASGNIATVTQSSVPPGTYQIKMDGDAKNGDSTVNLKITAVQRIKADSGGDFSYSYNTK AVPPGDFKVSVGGTTRKVTLKGKTLAITPAHPLEEIETVTEKNSSEIREKMENNTEAVLNSDQDSENVEHEEVHKSQPVK PQPVEKSGLPVDTVYMLGGMVAALLILILYSKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29780; Mature: 29780
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILALLTILPAAAAVDSWEISPENPTLGDTLRIKGSASPEEEVEIQVSFEKDVQASGGEY CCEEEEHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCE EYILEDVKIPDGFNNRFTVQASDARNLNVRVKMLIWITKSSEASGNIATVTQSSVPPGTY EEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCEE QIKMDGDAKNGDSTVNLKITAVQRIKADSGGDFSYSYNTKAVPPGDFKVSVGGTTRKVTL EEEECCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCEEEEEE KGKTLAITPAHPLEEIETVTEKNSSEIREKMENNTEAVLNSDQDSENVEHEEVHKSQPVK CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCC PQPVEKSGLPVDTVYMLGGMVAALLILILYSKRK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILALLTILPAAAAVDSWEISPENPTLGDTLRIKGSASPEEEVEIQVSFEKDVQASGGEY CCEEEEHHHHHHHHCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCE EYILEDVKIPDGFNNRFTVQASDARNLNVRVKMLIWITKSSEASGNIATVTQSSVPPGTY EEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCEE QIKMDGDAKNGDSTVNLKITAVQRIKADSGGDFSYSYNTKAVPPGDFKVSVGGTTRKVTL EEEECCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCEEEEEE KGKTLAITPAHPLEEIETVTEKNSSEIREKMENNTEAVLNSDQDSENVEHEEVHKSQPVK CCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHCCCCC PQPVEKSGLPVDTVYMLGGMVAALLILILYSKRK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA