Click here to switch to the map view.

The map label for this gene is ybfF [C]

Identifier: 21227286

GI number: 21227286

Start: 1406213

End: 1407181

Strand: Reverse

Name: ybfF [C]

Synonym: MM_1184

Alternate gene names: 21227286

Gene position: 1407181-1406213 (Counterclockwise)

Preceding gene: 21227289

Following gene: 21227285

Centisome position: 34.35

GC content: 50.98

Gene sequence:

>969_bases
ATGAGCAACGAACTTCTTATGAGCAGTGCAGAGTATCCGGCTCATCAAGAAAATAAGCGTTTCAGGGGTGCATCCTCTCA
AAATATAACTGTAATTCTTCCGGCATGCAATAATGAAGTTTCAATCGGAAGCCTTATCCTTCTCACCAGGCTTTATGCCG
ACAATGTAATTGTTGTCGATGACGGCAGCACTGACAGGACAGTCGAAATCTCCAGGAAAGCCGGAGCCCATGTAATTGTT
AACGAAGCCTGCAAAGGAAAAGTCGGATCCCTCAGGACCGGCTTCACAGCCGCAGCTGACCTGGGAGCAGATATTATAGT
AACCATGGACCCGGACGGCCAGCACAACCCTGCCGAAATCCCCAGAATCGTAGCCCCAATCATAGACGGAACTGCTGAGA
TGGTCAACGGCAGTCGCTACCTGAATTATCCCGGCAAAAATTCTTCCGTTTACAGCCGCACGGGCCAGACCATGCAGGAC
ATTTCTGCAAATATGAACTTCAACCTCAAAATTACCGACACTCAGAGCGGTTTCCGCGCCTATGCAGCCTCTACAAAGAG
CATTTTCCGCTTCAGCGGCAAAAAAACAGCCATAGAAAACGAAATGCTTGCCGACGCCGGAAGGTCAGGGATCCGCATTG
CTGAAGTCGAGATAGGGGCCTGCACCAGCGTCGGAGCTTCGATCCGGGACCCGGTAAAGTACACGCTGGGCGCCCTGAGG
ACCATGGCTGAAGATATAGAAGCCAACAAGCCTCTGTACTTCTATTCCGTGCCAGGCTTTGCTCTTGCGACATGCGGCTT
CTTTATGGGTTTCAAATTTATGGCAGATTATTTCTTCGGAATCGCAAGCCTCAACTTCGGGCACACATTCCTTATGGTCT
TCCTCGCCCTTGCAGGCGCGTACATGACTCTAAGGGGAATAATCGCCCACTCGATGGCAGGAGCGGCCAGACAGACCGAT
TCTACCTGA

Upstream 100 bases:

>100_bases
AAGTTGGTCTGGATTGCGGTGCAGCAACCGGTATTTAATGACGTTTGAGCAGCCACAATTATTTCTACTTTATAACATAA
ATTCAAAAGGGGTCATACAT

Downstream 100 bases:

>100_bases
AGGTTAAATTCAATCACAGAAATTCAGTCCATCAGCTTCGACACCAGACGCAAATGAATGTTCAGGCACACAGGTATGAG
CACTTAATTGAATTGAATTT

Product: dolichyl-phosphate mannose synthase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSNELLMSSAEYPAHQENKRFRGASSQNITVILPACNNEVSIGSLILLTRLYADNVIVVDDGSTDRTVEISRKAGAHVIV
NEACKGKVGSLRTGFTAAADLGADIIVTMDPDGQHNPAEIPRIVAPIIDGTAEMVNGSRYLNYPGKNSSVYSRTGQTMQD
ISANMNFNLKITDTQSGFRAYAASTKSIFRFSGKKTAIENEMLADAGRSGIRIAEVEIGACTSVGASIRDPVKYTLGALR
TMAEDIEANKPLYFYSVPGFALATCGFFMGFKFMADYFFGIASLNFGHTFLMVFLALAGAYMTLRGIIAHSMAGAARQTD
ST

Sequences:

>Translated_322_residues
MSNELLMSSAEYPAHQENKRFRGASSQNITVILPACNNEVSIGSLILLTRLYADNVIVVDDGSTDRTVEISRKAGAHVIV
NEACKGKVGSLRTGFTAAADLGADIIVTMDPDGQHNPAEIPRIVAPIIDGTAEMVNGSRYLNYPGKNSSVYSRTGQTMQD
ISANMNFNLKITDTQSGFRAYAASTKSIFRFSGKKTAIENEMLADAGRSGIRIAEVEIGACTSVGASIRDPVKYTLGALR
TMAEDIEANKPLYFYSVPGFALATCGFFMGFKFMADYFFGIASLNFGHTFLMVFLALAGAYMTLRGIIAHSMAGAARQTD
ST
>Mature_321_residues
SNELLMSSAEYPAHQENKRFRGASSQNITVILPACNNEVSIGSLILLTRLYADNVIVVDDGSTDRTVEISRKAGAHVIVN
EACKGKVGSLRTGFTAAADLGADIIVTMDPDGQHNPAEIPRIVAPIIDGTAEMVNGSRYLNYPGKNSSVYSRTGQTMQDI
SANMNFNLKITDTQSGFRAYAASTKSIFRFSGKKTAIENEMLADAGRSGIRIAEVEIGACTSVGASIRDPVKYTLGALRT
MAEDIEANKPLYFYSVPGFALATCGFFMGFKFMADYFFGIASLNFGHTFLMVFLALAGAYMTLRGIIAHSMAGAARQTDS
T

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34617; Mature: 34486

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELLMSSAEYPAHQENKRFRGASSQNITVILPACNNEVSIGSLILLTRLYADNVIVVD
CCCCEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
DGSTDRTVEISRKAGAHVIVNEACKGKVGSLRTGFTAAADLGADIIVTMDPDGQHNPAEI
CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHH
PRIVAPIIDGTAEMVNGSRYLNYPGKNSSVYSRTGQTMQDISANMNFNLKITDTQSGFRA
HHHHHHHHCCHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHCCCEEEEEEECCCCCHHH
YAASTKSIFRFSGKKTAIENEMLADAGRSGIRIAEVEIGACTSVGASIRDPVKYTLGALR
HHHHHHHHHEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHCHHHHHHHHHH
TMAEDIEANKPLYFYSVPGFALATCGFFMGFKFMADYFFGIASLNFGHTFLMVFLALAGA
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YMTLRGIIAHSMAGAARQTDST
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNELLMSSAEYPAHQENKRFRGASSQNITVILPACNNEVSIGSLILLTRLYADNVIVVD
CCCEEECCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEE
DGSTDRTVEISRKAGAHVIVNEACKGKVGSLRTGFTAAADLGADIIVTMDPDGQHNPAEI
CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCHHHH
PRIVAPIIDGTAEMVNGSRYLNYPGKNSSVYSRTGQTMQDISANMNFNLKITDTQSGFRA
HHHHHHHHCCHHHHHCCCEEEECCCCCCCCHHHCCCHHHHHHCCCEEEEEEECCCCCHHH
YAASTKSIFRFSGKKTAIENEMLADAGRSGIRIAEVEIGACTSVGASIRDPVKYTLGALR
HHHHHHHHHEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHCHHHHHHHHHH
TMAEDIEANKPLYFYSVPGFALATCGFFMGFKFMADYFFGIASLNFGHTFLMVFLALAGA
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YMTLRGIIAHSMAGAARQTDST
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]