| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is wzxE [C]
Identifier: 21227277
GI number: 21227277
Start: 1393186
End: 1394652
Strand: Reverse
Name: wzxE [C]
Synonym: MM_1175
Alternate gene names: 21227277
Gene position: 1394652-1393186 (Counterclockwise)
Preceding gene: 21227278
Following gene: 21227276
Centisome position: 34.05
GC content: 31.77
Gene sequence:
>1467_bases TTGATAGAGTCTAGAAGATTTGTTTCGGATGTTATGATTACTTTTATTGCATCTTTGGTGAATATAATTATCTCTTTCCC GATCAGTGTTGTGATTGGTAGGTATCTTGGTGTAGAAGATCTCGGAGCGTATCGGCTTGTCTTTTCGATATATGGCCTGT CCCTGTTGTTTGCAAATGCAGGCATACCTGCAGCAGTAATTAAGCAAATATCTGAGATCAAAGAAGATCCAAAGAGTACA GTTAAAGTGATCTCTTCTAGCTTTTTTACATCTTCACTATTAGGAATATTTTTTTTGATATTTTATCTGTTGTTTGCTGA AACTTTAAGCAATATTTTTGGAACGCCCGAATTGGCAGACTTAATTCGAATTATCTCTTTATCTTTTCCATTTTCCGTTA CGGGCAGTACTATGCTAGCTACACTAAATGGCTTTCGTGATATGAAAAAACATGCTACTGCCATTTTAATCCAAAGTGTT TTGATGCTATTCTTTACAATTTTATCTATTACCTTTGGTTACGGTGTTAATGGCGCTGTAGGTGCTTCAGTTATCTCTTC GATAGGATACTGTGTTTATCTTTTAAGGTATCTTGGAAAGTATATAAAAATTATCAATTTTTCAGATGCAGTTCACTACT CAAAATCAATGATCACTTTTGGTCTCCAAACTGTAGTGGCGAACGCCGTAAATCTAATAAATTTTCAGGCGGATACCATT ATGGTTGGATATTTTCTCACTAAGACTGATGTTGGATTCTACAGTGTTGCAGTCTTGCTTGCAAAATTATTGTGGTTAAT ACCAGATTCTATCCAAAAAATAACATATCCTTTAATTTCTGAGCATTACAATAATAGCGGGACTGAATACATTAATCGTG CTATTGAAACAATTATGAAATATACAATGTGTATTTCAATTGTTATTGGTAGTGGCATGATTTTTTATGGAGAAGGTATT ATTACTTCTATTTATGGAGCCTCATTTATTGAATCCGTGAATCCGTATTACATTTTAATTGTTGGTACAATGATTTTTAG TATTGTAAAATGTGTAAATTCATTATTTGCTAGTATTGGAAGAGTCGATTTATTCGCAAAAATACCTACATACTCCGCTG CTGTAAATATTTTACTTAACTTAGTCTTAATACCCATTTATCATATTAATGGAGCAGCCATTGCAACTTCAACCTCATTG CTAATTTATGTCTTGGTTATGATTTATTATATGAAAAAATTAGTTAATATCCACATTAATGTTATTTGGTATTCTAAAGC TATATTTTTATTTGCAATGCTGATTATAATAAATTATATTTTAAGTTTGTTTACACCTTTCAATTCATCAGGTATATTAA CAGTTAGTCTTGGATGCCTTTTGCTATGGATTTATATCTTAGAACCATCTGATAGAGTCTTTTTTTTAAGCCTAGTTACT AAATTAAAGAGCCTATCCCTAAACTAA
Upstream 100 bases:
>100_bases AGGATACACCTTAACTCTATTTAACCTCGTATTTTTCTTTCCCAATTTGCGTTTCTCCAAAAATATAAATATCTAAATCT CACTGAAGAGGGTCGAAATT
Downstream 100 bases:
>100_bases ATTATTTTGTGATTATAAATTTTGCATAATGTAATTCGATGTTCTATGGAAATCCATAGAGCATTATCTTCTCCCACAGA AACCACATACAGTGTGACCT
Product: oligosaccharide repeat-containing polymerase
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Related Protein; O-Antigen And Teichoic Acid Export Protein; Oligosaccharide Repeat-Containing Polymerase; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MIESRRFVSDVMITFIASLVNIIISFPISVVIGRYLGVEDLGAYRLVFSIYGLSLLFANAGIPAAVIKQISEIKEDPKST VKVISSSFFTSSLLGIFFLIFYLLFAETLSNIFGTPELADLIRIISLSFPFSVTGSTMLATLNGFRDMKKHATAILIQSV LMLFFTILSITFGYGVNGAVGASVISSIGYCVYLLRYLGKYIKIINFSDAVHYSKSMITFGLQTVVANAVNLINFQADTI MVGYFLTKTDVGFYSVAVLLAKLLWLIPDSIQKITYPLISEHYNNSGTEYINRAIETIMKYTMCISIVIGSGMIFYGEGI ITSIYGASFIESVNPYYILIVGTMIFSIVKCVNSLFASIGRVDLFAKIPTYSAAVNILLNLVLIPIYHINGAAIATSTSL LIYVLVMIYYMKKLVNIHINVIWYSKAIFLFAMLIIINYILSLFTPFNSSGILTVSLGCLLLWIYILEPSDRVFFLSLVT KLKSLSLN
Sequences:
>Translated_488_residues MIESRRFVSDVMITFIASLVNIIISFPISVVIGRYLGVEDLGAYRLVFSIYGLSLLFANAGIPAAVIKQISEIKEDPKST VKVISSSFFTSSLLGIFFLIFYLLFAETLSNIFGTPELADLIRIISLSFPFSVTGSTMLATLNGFRDMKKHATAILIQSV LMLFFTILSITFGYGVNGAVGASVISSIGYCVYLLRYLGKYIKIINFSDAVHYSKSMITFGLQTVVANAVNLINFQADTI MVGYFLTKTDVGFYSVAVLLAKLLWLIPDSIQKITYPLISEHYNNSGTEYINRAIETIMKYTMCISIVIGSGMIFYGEGI ITSIYGASFIESVNPYYILIVGTMIFSIVKCVNSLFASIGRVDLFAKIPTYSAAVNILLNLVLIPIYHINGAAIATSTSL LIYVLVMIYYMKKLVNIHINVIWYSKAIFLFAMLIIINYILSLFTPFNSSGILTVSLGCLLLWIYILEPSDRVFFLSLVT KLKSLSLN >Mature_488_residues MIESRRFVSDVMITFIASLVNIIISFPISVVIGRYLGVEDLGAYRLVFSIYGLSLLFANAGIPAAVIKQISEIKEDPKST VKVISSSFFTSSLLGIFFLIFYLLFAETLSNIFGTPELADLIRIISLSFPFSVTGSTMLATLNGFRDMKKHATAILIQSV LMLFFTILSITFGYGVNGAVGASVISSIGYCVYLLRYLGKYIKIINFSDAVHYSKSMITFGLQTVVANAVNLINFQADTI MVGYFLTKTDVGFYSVAVLLAKLLWLIPDSIQKITYPLISEHYNNSGTEYINRAIETIMKYTMCISIVIGSGMIFYGEGI ITSIYGASFIESVNPYYILIVGTMIFSIVKCVNSLFASIGRVDLFAKIPTYSAAVNILLNLVLIPIYHINGAAIATSTSL LIYVLVMIYYMKKLVNIHINVIWYSKAIFLFAMLIIINYILSLFTPFNSSGILTVSLGCLLLWIYILEPSDRVFFLSLVT KLKSLSLN
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54091; Mature: 54091
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESRRFVSDVMITFIASLVNIIISFPISVVIGRYLGVEDLGAYRLVFSIYGLSLLFANA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC GIPAAVIKQISEIKEDPKSTVKVISSSFFTSSLLGIFFLIFYLLFAETLSNIFGTPELAD CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LIRIISLSFPFSVTGSTMLATLNGFRDMKKHATAILIQSVLMLFFTILSITFGYGVNGAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GASVISSIGYCVYLLRYLGKYIKIINFSDAVHYSKSMITFGLQTVVANAVNLINFQADTI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCE MVGYFLTKTDVGFYSVAVLLAKLLWLIPDSIQKITYPLISEHYNNSGTEYINRAIETIMK EEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTMCISIVIGSGMIFYGEGIITSIYGASFIESVNPYYILIVGTMIFSIVKCVNSLFASIG HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHC RVDLFAKIPTYSAAVNILLNLVLIPIYHINGAAIATSTSLLIYVLVMIYYMKKLVNIHIN CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE VIWYSKAIFLFAMLIIINYILSLFTPFNSSGILTVSLGCLLLWIYILEPSDRVFFLSLVT EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH KLKSLSLN HHHHCCCC >Mature Secondary Structure MIESRRFVSDVMITFIASLVNIIISFPISVVIGRYLGVEDLGAYRLVFSIYGLSLLFANA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC GIPAAVIKQISEIKEDPKSTVKVISSSFFTSSLLGIFFLIFYLLFAETLSNIFGTPELAD CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LIRIISLSFPFSVTGSTMLATLNGFRDMKKHATAILIQSVLMLFFTILSITFGYGVNGAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH GASVISSIGYCVYLLRYLGKYIKIINFSDAVHYSKSMITFGLQTVVANAVNLINFQADTI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCE MVGYFLTKTDVGFYSVAVLLAKLLWLIPDSIQKITYPLISEHYNNSGTEYINRAIETIMK EEEEEHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YTMCISIVIGSGMIFYGEGIITSIYGASFIESVNPYYILIVGTMIFSIVKCVNSLFASIG HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHC RVDLFAKIPTYSAAVNILLNLVLIPIYHINGAAIATSTSLLIYVLVMIYYMKKLVNIHIN CHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE VIWYSKAIFLFAMLIIINYILSLFTPFNSSGILTVSLGCLLLWIYILEPSDRVFFLSLVT EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH KLKSLSLN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA