Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227276

Identifier: 21227276

GI number: 21227276

Start: 1392949

End: 1393164

Strand: Reverse

Name: 21227276

Synonym: MM_1174

Alternate gene names: NA

Gene position: 1393164-1392949 (Counterclockwise)

Preceding gene: 21227277

Following gene: 21227275

Centisome position: 34.01

GC content: 38.89

Gene sequence:

>216_bases
TTGCATAATGTAATTCGATGTTCTATGGAAATCCATAGAGCATTATCTTCTCCCACAGAAACCACATACAGTGTGACCTT
ATTCAGACTGAAGGAAATTAATGAATGGATTTTGCATGTTGTTACAGCTGGCTGCACATGGCAAGATGTTACCCACCAAT
ATGGCTCTAAACAACAGTTCATAGATCCCGTCTCTATTCCATTTCTATCTGTGTGA

Upstream 100 bases:

>100_bases
GATTTATATCTTAGAACCATCTGATAGAGTCTTTTTTTTAAGCCTAGTTACTAAATTAAAGAGCCTATCCCTAAACTAAA
TTATTTTGTGATTATAAATT

Downstream 100 bases:

>100_bases
ACATGGTACCACCTATCAGAAAATCTTTAATGAACTTTAAATTTTGGGATGGGCTCATACATAAAATAAGAGACTTTTTA
TTATTTTCTAGGTTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MHNVIRCSMEIHRALSSPTETTYSVTLFRLKEINEWILHVVTAGCTWQDVTHQYGSKQQFIDPVSIPFLSV

Sequences:

>Translated_71_residues
MHNVIRCSMEIHRALSSPTETTYSVTLFRLKEINEWILHVVTAGCTWQDVTHQYGSKQQFIDPVSIPFLSV
>Mature_71_residues
MHNVIRCSMEIHRALSSPTETTYSVTLFRLKEINEWILHVVTAGCTWQDVTHQYGSKQQFIDPVSIPFLSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8191; Mature: 8191

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNVIRCSMEIHRALSSPTETTYSVTLFRLKEINEWILHVVTAGCTWQDVTHQYGSKQQF
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
IDPVSIPFLSV
CCCCCCCEECC
>Mature Secondary Structure
MHNVIRCSMEIHRALSSPTETTYSVTLFRLKEINEWILHVVTAGCTWQDVTHQYGSKQQF
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
IDPVSIPFLSV
CCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA