| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is wecC [H]
Identifier: 21227274
GI number: 21227274
Start: 1390623
End: 1391879
Strand: Direct
Name: wecC [H]
Synonym: MM_1172
Alternate gene names: 21227274
Gene position: 1390623-1391879 (Clockwise)
Preceding gene: 21227273
Following gene: 21227287
Centisome position: 33.95
GC content: 44.39
Gene sequence:
>1257_bases GTGTCAAAAATCTGCGTACTCGGCCAGGGATATATTGGCCTCCCAACTGCTCTTCTTTTTGCAAACAACGGCCACGAAGT CGTGGGCATTGATGTAAACAAACGTGTTGTCGATACCCTCAAAGCAGGCAAAATGCCCTTTGAAGAAAAAGGCTTCCAGG AACTGCTGGACGGAGCCATTGCCAAAAATGCCTTCAGGGCAGAATCCCTTGTTGAAGAAGCCGATACCTTCCTAGTTGCA GTTCCGACACCTTTTGATTCAGAAATGCGGATGGCAGACCTTAAATATGTGGTCTCTGCCTGTGAGATGATCGTCCCCCA CCTGAAAAAAGGCAACCTCGTAATTATAGAGTCCACGATCCCCCCCAAAACCTGTGACAAACAGGTAAAACAAATCTTGG AAAAGTCCATCCTTAAAATGTGCGAGGACTTTTATGTTTCCCACTGTCCCGAAAGAGCGATCCCAGGCAACACCCTCCAT GAAATGGTCTACAACGACCGCGTAATTGGAGGAGTAGACGAAAAGTCCACCCAGCTTACAGCTGAACTTTATTCTTCCTT TGTAAAAGGAAACCTCCACCTGACCACCAGCACAACCGCAGAAATGATCAAGCTAATGGAAAATACTTTCCGTGACGTCA ACATCGCCCTTGCCAACGAGTTCGCCCAAATCGCTGACGACTACGGCATAGACGTCTGGAAAGCCATCGAAATCGCAAAC AAGCACCCTCGCGTAAGCATATTAAAACCCGGCCCAGGCGTAGGCGGTCACTGCATAGCTATCGATCCCTGGTTCCTCAC CGAAAACGCCAACAACAGCAGCCTCATCATGATGTCCAGGCAGATAAACGACTCGATGCCCCAGTATGTTTTGAAGATGG TAAAGGAAATTCTTGTAGGGATTGAGAATCCGACGATTACTGTTTTTGGGGTTGCGTATAAGGGAGATATTGCAGATACA AGAGCTACTCCAGCAAAGAAGTTTATAAGGCTTGCAGAAAAGGAAGGGTTCAAGGTTAAGATTTACGATCCTTTTGTTAA GGAGTGGAGCTATCCGATTCTGGAGTTAGGAGAGGCTGTGGAGGGAAGTGATTGTATAGTAGTTTTGACTGATCATTCAG AATTTAAGGAAATGGATCCTGAAAAATTCGGTAGCAAAATGAATAAATTGAATATTATAGATACAAGAAATATCATTAAC AAAAGTTTATGGAAAAAATCAGGATATAATATAAAAATCATTGGAAATGAGAGCTGA
Upstream 100 bases:
>100_bases AAATTGAATTTATTTTTTGAGTAAAAACATTAAACTCCATAAAAAATATATAGAACAAATATTAAAAGTTAAAAACATAA GATGAACCAGAGGTATATCT
Downstream 100 bases:
>100_bases TAAAAAGAGATATTTAGCTTATAAAAAATCTAACTATATTATTGAAAGTTATGCTTAACTGTAGAGATTTAAACTTTTAT ATCCAATTGAATTACTTGTG
Product: UDP-N-acetyl-D-mannosamine 6-dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSKICVLGQGYIGLPTALLFANNGHEVVGIDVNKRVVDTLKAGKMPFEEKGFQELLDGAIAKNAFRAESLVEEADTFLVA VPTPFDSEMRMADLKYVVSACEMIVPHLKKGNLVIIESTIPPKTCDKQVKQILEKSILKMCEDFYVSHCPERAIPGNTLH EMVYNDRVIGGVDEKSTQLTAELYSSFVKGNLHLTTSTTAEMIKLMENTFRDVNIALANEFAQIADDYGIDVWKAIEIAN KHPRVSILKPGPGVGGHCIAIDPWFLTENANNSSLIMMSRQINDSMPQYVLKMVKEILVGIENPTITVFGVAYKGDIADT RATPAKKFIRLAEKEGFKVKIYDPFVKEWSYPILELGEAVEGSDCIVVLTDHSEFKEMDPEKFGSKMNKLNIIDTRNIIN KSLWKKSGYNIKIIGNES
Sequences:
>Translated_418_residues MSKICVLGQGYIGLPTALLFANNGHEVVGIDVNKRVVDTLKAGKMPFEEKGFQELLDGAIAKNAFRAESLVEEADTFLVA VPTPFDSEMRMADLKYVVSACEMIVPHLKKGNLVIIESTIPPKTCDKQVKQILEKSILKMCEDFYVSHCPERAIPGNTLH EMVYNDRVIGGVDEKSTQLTAELYSSFVKGNLHLTTSTTAEMIKLMENTFRDVNIALANEFAQIADDYGIDVWKAIEIAN KHPRVSILKPGPGVGGHCIAIDPWFLTENANNSSLIMMSRQINDSMPQYVLKMVKEILVGIENPTITVFGVAYKGDIADT RATPAKKFIRLAEKEGFKVKIYDPFVKEWSYPILELGEAVEGSDCIVVLTDHSEFKEMDPEKFGSKMNKLNIIDTRNIIN KSLWKKSGYNIKIIGNES >Mature_417_residues SKICVLGQGYIGLPTALLFANNGHEVVGIDVNKRVVDTLKAGKMPFEEKGFQELLDGAIAKNAFRAESLVEEADTFLVAV PTPFDSEMRMADLKYVVSACEMIVPHLKKGNLVIIESTIPPKTCDKQVKQILEKSILKMCEDFYVSHCPERAIPGNTLHE MVYNDRVIGGVDEKSTQLTAELYSSFVKGNLHLTTSTTAEMIKLMENTFRDVNIALANEFAQIADDYGIDVWKAIEIANK HPRVSILKPGPGVGGHCIAIDPWFLTENANNSSLIMMSRQINDSMPQYVLKMVKEILVGIENPTITVFGVAYKGDIADTR ATPAKKFIRLAEKEGFKVKIYDPFVKEWSYPILELGEAVEGSDCIVVLTDHSEFKEMDPEKFGSKMNKLNIIDTRNIINK SLWKKSGYNIKIIGNES
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=464, Percent_Identity=25.6465517241379, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI296040443, Length=457, Percent_Identity=22.9759299781182, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI296040438, Length=366, Percent_Identity=24.8633879781421, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI48994968, Length=421, Percent_Identity=38.7173396674584, Blast_Score=297, Evalue=9e-82, Organism=Escherichia coli, GI1788340, Length=368, Percent_Identity=27.7173913043478, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17560350, Length=461, Percent_Identity=26.6811279826464, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI17136908, Length=461, Percent_Identity=24.295010845987, Blast_Score=128, Evalue=8e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 46559; Mature: 46428
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKICVLGQGYIGLPTALLFANNGHEVVGIDVNKRVVDTLKAGKMPFEEKGFQELLDGAI CCCEEEECCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHH AKNAFRAESLVEEADTFLVAVPTPFDSEMRMADLKYVVSACEMIVPHLKKGNLVIIESTI HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC PPKTCDKQVKQILEKSILKMCEDFYVSHCPERAIPGNTLHEMVYNDRVIGGVDEKSTQLT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHHHHH AELYSSFVKGNLHLTTSTTAEMIKLMENTFRDVNIALANEFAQIADDYGIDVWKAIEIAN HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHCC KHPRVSILKPGPGVGGHCIAIDPWFLTENANNSSLIMMSRQINDSMPQYVLKMVKEILVG CCCCEEEECCCCCCCCEEEEECCEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHC IENPTITVFGVAYKGDIADTRATPAKKFIRLAEKEGFKVKIYDPFVKEWSYPILELGEAV CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCCHHHHCCCC EGSDCIVVLTDHSEFKEMDPEKFGSKMNKLNIIDTRNIINKSLWKKSGYNIKIIGNES CCCCEEEEEECCHHHHHCCHHHHCCHHHCEEEEEHHHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure SKICVLGQGYIGLPTALLFANNGHEVVGIDVNKRVVDTLKAGKMPFEEKGFQELLDGAI CCEEEECCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHH AKNAFRAESLVEEADTFLVAVPTPFDSEMRMADLKYVVSACEMIVPHLKKGNLVIIESTI HHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC PPKTCDKQVKQILEKSILKMCEDFYVSHCPERAIPGNTLHEMVYNDRVIGGVDEKSTQLT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEECCCCCHHHHHH AELYSSFVKGNLHLTTSTTAEMIKLMENTFRDVNIALANEFAQIADDYGIDVWKAIEIAN HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHCC KHPRVSILKPGPGVGGHCIAIDPWFLTENANNSSLIMMSRQINDSMPQYVLKMVKEILVG CCCCEEEECCCCCCCCEEEEECCEEEECCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHC IENPTITVFGVAYKGDIADTRATPAKKFIRLAEKEGFKVKIYDPFVKEWSYPILELGEAV CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCCHHHHCCCC EGSDCIVVLTDHSEFKEMDPEKFGSKMNKLNIIDTRNIINKSLWKKSGYNIKIIGNES CCCCEEEEEECCHHHHHCCHHHHCCHHHCEEEEEHHHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA