| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227273
Identifier: 21227273
GI number: 21227273
Start: 1389509
End: 1390546
Strand: Direct
Name: 21227273
Synonym: MM_1171
Alternate gene names: NA
Gene position: 1389509-1390546 (Clockwise)
Preceding gene: 21227272
Following gene: 21227274
Centisome position: 33.92
GC content: 26.01
Gene sequence:
>1038_bases ATGATAACTTCAAGAAAAAACAGGAAAAAAGATGTTTTTTATAGGCTAAACATTTTAGATGGGTTCGCTATAGTTTTCAT TGTAATTTTTCATGCATTGGGAGGTCTGAAAACATCAGATGCGATATTTATAAGTAAATATTTGGTAGTTTTTGGACTTA GTTTATTTACTTTTTCAGCTGGATTTAAATTCGGATTTAATCACTCTGATGAACTTGAAGAAAAAGATTTTTTAAAAAAA TATTTCATAAAAAGATTTGTCCGTTTGTATAAACCTTATATTGGATACAGTTTACTTATATCAGTTCCATTATTCTTTGT AACCTATATCTCAGTTTACTATTTAAATTTAGATTATAAAGGGCTAAATATTTTTTGGGAGGATCTAACATATTATAAAT TATTTTATTTCATATTAGGTGAAAATTTTATTTGTGGACACTTGTGGTATCTTATCACTCTGATAGTAATAACTACACTT TGTTTCTTTATTTTATATTATTCAAACATTCACACTTTATATCTATTTGCAGTTATACTATTGACATTTCAGATAATATC CTGGGATTACTTGAGCCAACATTCAGAATTTTTGTTTAAAACTACAAAATATATGGTAATATATATCTTCGGGATATTTT GTTCGCTAGATGAAAGGCGTGAATCTAGTAAAAAAATGTTAATATATTCAATTGCAGTTACAACACTACTATTACTTTCA ATATCGGATTCCAGCATATGGATAAACAAATATAACTTTTATGGCATAATATTTCCACCATTAGGATATATGCTTTCAAA TTATTTGATGAATTTTGAATATATAAGTGCTTTGTTTAACAAAATTGGAGAATATTCATTCCAAATATACCTGTTCCATT GGCCACTAGTATTACCAATAATACAGAGATCAACTATGAACATATTGAAAATTGATTTTGTTTTAGTTCCATACTTTGTG TCATTCCTTACAATTATATTGTGTATATATGTGTATAAGGTCACTAAAAAACTGAAATTGAATTTATTTTTTGAGTAA
Upstream 100 bases:
>100_bases CTGAGTGGGAAAACCCATATGGAAATGGGAATACCTCAAAAATAATTGTCAAACAATTGATCTGATCCAACAATCAAAAT GAACCCAAATAGGAATTTTT
Downstream 100 bases:
>100_bases AAACATTAAACTCCATAAAAAATATATAGAACAAATATTAAAAGTTAAAAACATAAGATGAACCAGAGGTATATCTGTGT CAAAAATCTGCGTACTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MITSRKNRKKDVFYRLNILDGFAIVFIVIFHALGGLKTSDAIFISKYLVVFGLSLFTFSAGFKFGFNHSDELEEKDFLKK YFIKRFVRLYKPYIGYSLLISVPLFFVTYISVYYLNLDYKGLNIFWEDLTYYKLFYFILGENFICGHLWYLITLIVITTL CFFILYYSNIHTLYLFAVILLTFQIISWDYLSQHSEFLFKTTKYMVIYIFGIFCSLDERRESSKKMLIYSIAVTTLLLLS ISDSSIWINKYNFYGIIFPPLGYMLSNYLMNFEYISALFNKIGEYSFQIYLFHWPLVLPIIQRSTMNILKIDFVLVPYFV SFLTIILCIYVYKVTKKLKLNLFFE
Sequences:
>Translated_345_residues MITSRKNRKKDVFYRLNILDGFAIVFIVIFHALGGLKTSDAIFISKYLVVFGLSLFTFSAGFKFGFNHSDELEEKDFLKK YFIKRFVRLYKPYIGYSLLISVPLFFVTYISVYYLNLDYKGLNIFWEDLTYYKLFYFILGENFICGHLWYLITLIVITTL CFFILYYSNIHTLYLFAVILLTFQIISWDYLSQHSEFLFKTTKYMVIYIFGIFCSLDERRESSKKMLIYSIAVTTLLLLS ISDSSIWINKYNFYGIIFPPLGYMLSNYLMNFEYISALFNKIGEYSFQIYLFHWPLVLPIIQRSTMNILKIDFVLVPYFV SFLTIILCIYVYKVTKKLKLNLFFE >Mature_345_residues MITSRKNRKKDVFYRLNILDGFAIVFIVIFHALGGLKTSDAIFISKYLVVFGLSLFTFSAGFKFGFNHSDELEEKDFLKK YFIKRFVRLYKPYIGYSLLISVPLFFVTYISVYYLNLDYKGLNIFWEDLTYYKLFYFILGENFICGHLWYLITLIVITTL CFFILYYSNIHTLYLFAVILLTFQIISWDYLSQHSEFLFKTTKYMVIYIFGIFCSLDERRESSKKMLIYSIAVTTLLLLS ISDSSIWINKYNFYGIIFPPLGYMLSNYLMNFEYISALFNKIGEYSFQIYLFHWPLVLPIIQRSTMNILKIDFVLVPYFV SFLTIILCIYVYKVTKKLKLNLFFE
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41145; Mature: 41145
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSRKNRKKDVFYRLNILDGFAIVFIVIFHALGGLKTSDAIFISKYLVVFGLSLFTFSA CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC GFKFGFNHSDELEEKDFLKKYFIKRFVRLYKPYIGYSLLISVPLFFVTYISVYYLNLDYK CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC GLNIFWEDLTYYKLFYFILGENFICGHLWYLITLIVITTLCFFILYYSNIHTLYLFAVIL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFQIISWDYLSQHSEFLFKTTKYMVIYIFGIFCSLDERRESSKKMLIYSIAVTTLLLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEHHHHHHHHHHHHE ISDSSIWINKYNFYGIIFPPLGYMLSNYLMNFEYISALFNKIGEYSFQIYLFHWPLVLPI ECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHH IQRSTMNILKIDFVLVPYFVSFLTIILCIYVYKVTKKLKLNLFFE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC >Mature Secondary Structure MITSRKNRKKDVFYRLNILDGFAIVFIVIFHALGGLKTSDAIFISKYLVVFGLSLFTFSA CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC GFKFGFNHSDELEEKDFLKKYFIKRFVRLYKPYIGYSLLISVPLFFVTYISVYYLNLDYK CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC GLNIFWEDLTYYKLFYFILGENFICGHLWYLITLIVITTLCFFILYYSNIHTLYLFAVIL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTFQIISWDYLSQHSEFLFKTTKYMVIYIFGIFCSLDERRESSKKMLIYSIAVTTLLLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEHHHHHHHHHHHHE ISDSSIWINKYNFYGIIFPPLGYMLSNYLMNFEYISALFNKIGEYSFQIYLFHWPLVLPI ECCCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHH IQRSTMNILKIDFVLVPYFVSFLTIILCIYVYKVTKKLKLNLFFE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA