| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227252
Identifier: 21227252
GI number: 21227252
Start: 1367003
End: 1367197
Strand: Reverse
Name: 21227252
Synonym: MM_1150
Alternate gene names: NA
Gene position: 1367197-1367003 (Counterclockwise)
Preceding gene: 21227261
Following gene: 21227249
Centisome position: 33.38
GC content: 43.08
Gene sequence:
>195_bases ATGACTCCACCGGGAGTCCCTGATGGCGCATCAGTCGCCGTAGCGGTTTTGCTTGTAATGTTACTTCTCAGAGACATCCT TCCTTTGCTAAAAAACTGGGATGAATCTGTACAAACTTCTTTGAATATGGGAATTCTTCCACTTCTGTTTTCTTTCGGTG CAGTAGTCCTTTATAAACTCGTAGCTCTCTTCTAA
Upstream 100 bases:
>100_bases TCGCACATTTGATTCTTTTATACTTCAATCAACTAGAGGAGTTTTAACTACGCTCAGTTTAATTTCATCAACTTCTGCTT TTTCGGGCGAGCTAACAATG
Downstream 100 bases:
>100_bases TTTATGGAGAGAGCTTAATATTTTAAGCCTGTAAGCTAGAGACAAAACACTGTAGAGATAAACCATTTTTTATTTTAAAA GTTCTGAGGAAAATTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MTPPGVPDGASVAVAVLLVMLLLRDILPLLKNWDESVQTSLNMGILPLLFSFGAVVLYKLVALF
Sequences:
>Translated_64_residues MTPPGVPDGASVAVAVLLVMLLLRDILPLLKNWDESVQTSLNMGILPLLFSFGAVVLYKLVALF >Mature_63_residues TPPGVPDGASVAVAVLLVMLLLRDILPLLKNWDESVQTSLNMGILPLLFSFGAVVLYKLVALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6881; Mature: 6750
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPGVPDGASVAVAVLLVMLLLRDILPLLKNWDESVQTSLNMGILPLLFSFGAVVLYKL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VALF HHHC >Mature Secondary Structure TPPGVPDGASVAVAVLLVMLLLRDILPLLKNWDESVQTSLNMGILPLLFSFGAVVLYKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VALF HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA