Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is epsE [H]

Identifier: 21227243

GI number: 21227243

Start: 1350918

End: 1351853

Strand: Direct

Name: epsE [H]

Synonym: MM_1141

Alternate gene names: 21227243

Gene position: 1350918-1351853 (Clockwise)

Preceding gene: 21227240

Following gene: 21227244

Centisome position: 32.98

GC content: 34.72

Gene sequence:

>936_bases
ATGAAAAAAGATCTTATTAGCGTTGTAATGTCTGCATACAATTCTGAAAAATTTATCTCGGACTCGATTTCGAGTATTTT
AGATCAAACCTATGAAAATTGGGAGCTTATAATTATAAATGATGCCTCTTCGGACAATACGCTGAAGATAGTTAATCAAT
TTTCAGAAAAAGACCCCAGAATTAAAGTAATTGATAATGAAAATAATCTTGGTTTAACAATTTCTCTTAATATTGGGATA
AACAATTCTAAAGGGGAGTTTATTGCAAGGCTGGACTCGGATGACTTTGCAGAGCCTTCAAGATTGGAAAAAGAGCTTGA
TCATTTGCATGCTTATCCAGAAGCGGGGCTGGTAGGATCAGGAGCACATCTGATTAATAGTTCCGGAAATAAAATTGGCT
CTATGAATGTAATGTCACAACCATACTTTGTAAATAGATTTCTTATCAATCTTAATCCTTTTATTCATAGTTCTATAATG
GTCAGAAAGAAAGCCCTGGATAATGTGGGATCCTATAGAGAAAAATTTCGATACTCACAGGACTATGATCTTATTTTAAG
GCTCAGTGATAAATATAAATTATCCAACATCGCACTACCTTTAATTAGATGGAGAGTTTCCGATAGCAGTGTAACTATGC
AACACCACACCCTTCAACGAATATATGCAGATATCGCCAGAGAGTTCGCAATTGAAAGAAGAAACTCTGGTCATGATAGT
TATGAGTCTACCGAGTTCGATACTTTGATTCATGAAATGAGAATAAGAAATCAGGGCAGGTATCTGTGTGACCATGGTGT
TTATGACCTGTTGTTTAATAAGAAATATAAAGAAGGGTGTTCGGAATTAATAAAAGGGATCTCAAAAGGCGGATTTCCAT
ATAATTCGTTTTATAGAGGGATCACGCAAGTAATATCTAAAGTGAATATCCAGTAA

Upstream 100 bases:

>100_bases
ATTGCTAAAATTTTAAACTAGAATTTTTAAATATCTAAAATAATATAGTAAAGAGTGTAATCGGAAATCATCTAAAAAAC
TGTTTACGGTTGTTTTCTCA

Downstream 100 bases:

>100_bases
TCACATTTTGAGAAAAACACTTTCCGAGACAAAAATATGTTATTTTATGGAATTAAAACGATCTTTTTTCACTTAATAAT
ATAGGACAAAAATTATGAAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI
NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM
VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS
YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ

Sequences:

>Translated_311_residues
MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI
NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM
VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS
YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ
>Mature_311_residues
MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI
NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM
VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS
YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788372, Length=199, Percent_Identity=29.1457286432161, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787259, Length=132, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790044, Length=144, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35655; Mature: 35655

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCC
IKVIDNENNLGLTISLNIGINNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGS
EEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIMVRKKALDNVGSYREKFRYSQ
CHHEECCCCCCEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS
CCEEEEEECCCEEHHHEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRG
CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH
ITQVISKVNIQ
HHHHHHHCCCC
>Mature Secondary Structure
MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCC
IKVIDNENNLGLTISLNIGINNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGS
EEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIMVRKKALDNVGSYREKFRYSQ
CHHEECCCCCCEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS
CCEEEEEECCCEEHHHEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRG
CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH
ITQVISKVNIQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]