| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is exoA [H]
Identifier: 21227241
GI number: 21227241
Start: 1348065
End: 1349084
Strand: Reverse
Name: exoA [H]
Synonym: MM_1139
Alternate gene names: 21227241
Gene position: 1349084-1348065 (Counterclockwise)
Preceding gene: 21227242
Following gene: 21227239
Centisome position: 32.93
GC content: 40.1
Gene sequence:
>1020_bases ATGGAATGTCCTTTTGTTTCGGTTGTAGTGGGTATTCGCAACGAAGAACGATATATTGAAGAATGTATCGAGTCGCTACT TCGTCTGGATTACCCCCAGGATTCTTACGAGATTATTATCGTCGATGGAATGTCCACCGACAGAACCCGGGAACTGGTAC AGAAATACCCGGTCAGGCTTCTTCTTAATGAGAGAAAAAACGTTGCAGCGGCAAGAAACCTTGGAGTGCAGAATTCCATG GGAGATTTTGTTGCATTTACAGACGGGGACTGCAAGGCAGACCCTCTATGGTTAAAAACCCTTGTTACTGAAATGAAAAA TGCTCCTGAAGATGTGGTATGTGTTGGTGGGCCTAACTTAATATTTGATACCGATCCTGTTTTTGGTAGAGTGGTGGGGC ATGCCCAGGAAACATTTCTCGGTTCAGGAGGTTCTGCTCAGTCTAAAAATTCCTTAAAGAAACACTATGTTAGCTCTCTC CCTAACTGCAATGCGATGTATAAAAAAAATACAATAATTGAAGCAGGATATTTCGATGAGCGGTTTGTTGTAGGTCAGGA TGGAGACCTTAACTACAGAATAAATAAAAAAGGTTATAAGTTCTTGTATATTCCAGAAGCAATAGTTCTGCATCATAGAA GGGGAACTCTCAAGTCATTTTCAGTAAGAATGTTCAAGTATGGCATGTGGATGGGGGAACTTTTTAAAAAACATGGGGAG CTTGTTCGGTGGTATGCGATTTTGCCCTCTGTCGCTATTCTCTTCTCAGTTTTTTCGCTTATCATTTCTCCGGTCTATAC CACGCCAATAATAGTCCTGCTCTTAATGGGATTTTTATATCTCATTCTGGTCTTCATTGCCTCAATTCAGGTAATATTTA AAATGAAATCAAAGTACGGACTTTATGCCCTTGTTGTGATTCCTGTGCAGCACATCACTTATGGTATGGGATTTTTGTAC AGTTTTGCAAACTCTCTCTATAAATCAAAAGGAGTGTCTTCTTCGATAGTTCAAAATTAA
Upstream 100 bases:
>100_bases TTTCATGATATTTACAGGAATCATACTGCATGCAATTTCGAGAATGATGTTTATTAATGAACAGATTCGAAGACAATAAC GGTTAAAAAGTGGTTATTTT
Downstream 100 bases:
>100_bases GGATCTAGCCCCATTTTAGAGCTGCTTTCTTTACCCAAATCACAAATTACTGAAATAACCTGAATTTGGGACAGATTGGA GCAAAAAGTTCTTTTTCGAC
Product: dolichyl-phosphate mannose synthase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MECPFVSVVVGIRNEERYIEECIESLLRLDYPQDSYEIIIVDGMSTDRTRELVQKYPVRLLLNERKNVAAARNLGVQNSM GDFVAFTDGDCKADPLWLKTLVTEMKNAPEDVVCVGGPNLIFDTDPVFGRVVGHAQETFLGSGGSAQSKNSLKKHYVSSL PNCNAMYKKNTIIEAGYFDERFVVGQDGDLNYRINKKGYKFLYIPEAIVLHHRRGTLKSFSVRMFKYGMWMGELFKKHGE LVRWYAILPSVAILFSVFSLIISPVYTTPIIVLLLMGFLYLILVFIASIQVIFKMKSKYGLYALVVIPVQHITYGMGFLY SFANSLYKSKGVSSSIVQN
Sequences:
>Translated_339_residues MECPFVSVVVGIRNEERYIEECIESLLRLDYPQDSYEIIIVDGMSTDRTRELVQKYPVRLLLNERKNVAAARNLGVQNSM GDFVAFTDGDCKADPLWLKTLVTEMKNAPEDVVCVGGPNLIFDTDPVFGRVVGHAQETFLGSGGSAQSKNSLKKHYVSSL PNCNAMYKKNTIIEAGYFDERFVVGQDGDLNYRINKKGYKFLYIPEAIVLHHRRGTLKSFSVRMFKYGMWMGELFKKHGE LVRWYAILPSVAILFSVFSLIISPVYTTPIIVLLLMGFLYLILVFIASIQVIFKMKSKYGLYALVVIPVQHITYGMGFLY SFANSLYKSKGVSSSIVQN >Mature_339_residues MECPFVSVVVGIRNEERYIEECIESLLRLDYPQDSYEIIIVDGMSTDRTRELVQKYPVRLLLNERKNVAAARNLGVQNSM GDFVAFTDGDCKADPLWLKTLVTEMKNAPEDVVCVGGPNLIFDTDPVFGRVVGHAQETFLGSGGSAQSKNSLKKHYVSSL PNCNAMYKKNTIIEAGYFDERFVVGQDGDLNYRINKKGYKFLYIPEAIVLHHRRGTLKSFSVRMFKYGMWMGELFKKHGE LVRWYAILPSVAILFSVFSLIISPVYTTPIIVLLLMGFLYLILVFIASIQVIFKMKSKYGLYALVVIPVQHITYGMGFLY SFANSLYKSKGVSSSIVQN
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the second sugar (glucose). Catalyzes the formation of a beta-1,3 linkage with the galactose lipid carrier [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38352; Mature: 38352
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECPFVSVVVGIRNEERYIEECIESLLRLDYPQDSYEIIIVDGMSTDRTRELVQKYPVRL CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHE LLNERKNVAAARNLGVQNSMGDFVAFTDGDCKADPLWLKTLVTEMKNAPEDVVCVGGPNL EHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCE IFDTDPVFGRVVGHAQETFLGSGGSAQSKNSLKKHYVSSLPNCNAMYKKNTIIEAGYFDE EEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC RFVVGQDGDLNYRINKKGYKFLYIPEAIVLHHRRGTLKSFSVRMFKYGMWMGELFKKHGE EEEECCCCCEEEEECCCCCEEEEECHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVRWYAILPSVAILFSVFSLIISPVYTTPIIVLLLMGFLYLILVFIASIQVIFKMKSKYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LYALVVIPVQHITYGMGFLYSFANSLYKSKGVSSSIVQN EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MECPFVSVVVGIRNEERYIEECIESLLRLDYPQDSYEIIIVDGMSTDRTRELVQKYPVRL CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCHHE LLNERKNVAAARNLGVQNSMGDFVAFTDGDCKADPLWLKTLVTEMKNAPEDVVCVGGPNL EHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCE IFDTDPVFGRVVGHAQETFLGSGGSAQSKNSLKKHYVSSLPNCNAMYKKNTIIEAGYFDE EEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCC RFVVGQDGDLNYRINKKGYKFLYIPEAIVLHHRRGTLKSFSVRMFKYGMWMGELFKKHGE EEEECCCCCEEEEECCCCCEEEEECHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVRWYAILPSVAILFSVFSLIISPVYTTPIIVLLLMGFLYLILVFIASIQVIFKMKSKYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LYALVVIPVQHITYGMGFLYSFANSLYKSKGVSSSIVQN EEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]