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The map label for this gene is 21227239

Identifier: 21227239

GI number: 21227239

Start: 1344901

End: 1346085

Strand: Reverse

Name: 21227239

Synonym: MM_1137

Alternate gene names: NA

Gene position: 1346085-1344901 (Counterclockwise)

Preceding gene: 21227241

Following gene: 21227238

Centisome position: 32.86

GC content: 39.49

Gene sequence:

>1185_bases
ATGTTTAAAAAAGTAAATAACATTTTTCTGGTTTATTACAGCTCTTTTACCACAAAATCAGGCTCTAATATACACATACT
CGAGCTCTTAAATAATTTGAAGAAATATACGGATGTAGTTTTGTTTGCGCCAGGTCAAAAAGGCATAGAGCGCGTTTTTT
CCGGAGTAAAGTATGTGCCTGTGATAAATAACAAGTACCTTGTACAGCCTTCTTACGAGATCATGCTGTCTGTTTATCTT
CTGTACGCATGTTTAAAAAACAGACCTGAAGTGCTTTATCTCCGTCAGAACTCTTTCCCGTTCTTACCTATTGCTTTATG
TAGGATTTTTAAGATCCCCTCCATAGTGGAAGTTAACGGGCTGGTTATGGACGAGCTCAGTGTGAGTCCGGATTCTAAAT
CTTTTGCATACAGGGTTTTTTCCTATCTGGCGCTCCGTTCTGAAAAATTTAATTACACGTACTGTGACCGGATAGTTTCC
GTAACTGACAAGCTAAAGGATGAACTTGTCAGGTTATATTCAGTTCCTGCAGAGAAAGTTATTGTGATCAATAACGGAGC
AAATACTGATATTTTCAAACCTATGGACCAGAAGCAGGTAAGGGATAGGCTCAAACTTGATAATTCAAAAAAGTATGTGT
GTTTTGTGGGGCACCTTGCAGCTTGGCAGGGAGTTGAGTTTCTAATTTATGCAGCTCCGTATATTCTGGAAAAATCTCCT
GATGTTCGTTTCCTTGTTGTCGGAGACGGAGTTATGAAGGACAAATTGATAGAAATTGCCTCAAAGACAGGGGTTCTGGA
AAAATTTACTTTTACCGGAAGGGTTCCCTATGAAAGTGTCCCTGAATATATCAACGCTGCCGATGTTTGTGTTGCTCCTT
TTATTAAGGATAGAAATTCTAAAATAGGACTCTCTGCCTTAAAAACATATGAATACCTCGCATGTGGAAAGCCTATTGTA
GCAAGTGATATCGCGGGTGTTAAAGATCTTCTTGATCTTTCAGGAGGTGGAATTTCAGTACCTCCGGAGATCCCGGGAGA
TCTTGCCAATGCAGTGGTAGAGCTTATTTCCGATCAAAATATAAGGAACGCAATGGGAGAGAGGGGTCGTAAATATGTTA
TTGAGAATCATAGCTGGGACGAAGTCGCAAGAAAGATCCTTGATATCTGTTATGAAATCATTTGA

Upstream 100 bases:

>100_bases
TTTTTTAATCATGAATAAGCTCTTCCAATCTCTAAAAATTAATACCTGGAGTCGTGGGATAAGCTAATTAACTACTTTTG
CTATTGAGGTAACGGCAACT

Downstream 100 bases:

>100_bases
TTTTTCTTTTTTACTCCCTGGCGCTTCCATGATATCAATATCTGACCTTTGCTGTACTCATTGTATTAATTATTCGATGT
TTTAACAACATATTACGATT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFKKVNNIFLVYYSSFTTKSGSNIHILELLNNLKKYTDVVLFAPGQKGIERVFSGVKYVPVINNKYLVQPSYEIMLSVYL
LYACLKNRPEVLYLRQNSFPFLPIALCRIFKIPSIVEVNGLVMDELSVSPDSKSFAYRVFSYLALRSEKFNYTYCDRIVS
VTDKLKDELVRLYSVPAEKVIVINNGANTDIFKPMDQKQVRDRLKLDNSKKYVCFVGHLAAWQGVEFLIYAAPYILEKSP
DVRFLVVGDGVMKDKLIEIASKTGVLEKFTFTGRVPYESVPEYINAADVCVAPFIKDRNSKIGLSALKTYEYLACGKPIV
ASDIAGVKDLLDLSGGGISVPPEIPGDLANAVVELISDQNIRNAMGERGRKYVIENHSWDEVARKILDICYEII

Sequences:

>Translated_394_residues
MFKKVNNIFLVYYSSFTTKSGSNIHILELLNNLKKYTDVVLFAPGQKGIERVFSGVKYVPVINNKYLVQPSYEIMLSVYL
LYACLKNRPEVLYLRQNSFPFLPIALCRIFKIPSIVEVNGLVMDELSVSPDSKSFAYRVFSYLALRSEKFNYTYCDRIVS
VTDKLKDELVRLYSVPAEKVIVINNGANTDIFKPMDQKQVRDRLKLDNSKKYVCFVGHLAAWQGVEFLIYAAPYILEKSP
DVRFLVVGDGVMKDKLIEIASKTGVLEKFTFTGRVPYESVPEYINAADVCVAPFIKDRNSKIGLSALKTYEYLACGKPIV
ASDIAGVKDLLDLSGGGISVPPEIPGDLANAVVELISDQNIRNAMGERGRKYVIENHSWDEVARKILDICYEII
>Mature_394_residues
MFKKVNNIFLVYYSSFTTKSGSNIHILELLNNLKKYTDVVLFAPGQKGIERVFSGVKYVPVINNKYLVQPSYEIMLSVYL
LYACLKNRPEVLYLRQNSFPFLPIALCRIFKIPSIVEVNGLVMDELSVSPDSKSFAYRVFSYLALRSEKFNYTYCDRIVS
VTDKLKDELVRLYSVPAEKVIVINNGANTDIFKPMDQKQVRDRLKLDNSKKYVCFVGHLAAWQGVEFLIYAAPYILEKSP
DVRFLVVGDGVMKDKLIEIASKTGVLEKFTFTGRVPYESVPEYINAADVCVAPFIKDRNSKIGLSALKTYEYLACGKPIV
ASDIAGVKDLLDLSGGGISVPPEIPGDLANAVVELISDQNIRNAMGERGRKYVIENHSWDEVARKILDICYEII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=270, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 44461; Mature: 44461

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKVNNIFLVYYSSFTTKSGSNIHILELLNNLKKYTDVVLFAPGQKGIERVFSGVKYVP
CCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCEEEE
VINNKYLVQPSYEIMLSVYLLYACLKNRPEVLYLRQNSFPFLPIALCRIFKIPSIVEVNG
EECCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECC
LVMDELSVSPDSKSFAYRVFSYLALRSEKFNYTYCDRIVSVTDKLKDELVRLYSVPAEKV
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
IVINNGANTDIFKPMDQKQVRDRLKLDNSKKYVCFVGHLAAWQGVEFLIYAAPYILEKSP
EEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHCCCEEEEEECHHHCCCCC
DVRFLVVGDGVMKDKLIEIASKTGVLEKFTFTGRVPYESVPEYINAADVCVAPFIKDRNS
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCC
KIGLSALKTYEYLACGKPIVASDIAGVKDLLDLSGGGISVPPEIPGDLANAVVELISDQN
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCC
IRNAMGERGRKYVIENHSWDEVARKILDICYEII
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFKKVNNIFLVYYSSFTTKSGSNIHILELLNNLKKYTDVVLFAPGQKGIERVFSGVKYVP
CCCCCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHCEEEECCCHHHHHHHHCCCEEEE
VINNKYLVQPSYEIMLSVYLLYACLKNRPEVLYLRQNSFPFLPIALCRIFKIPSIVEVNG
EECCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECC
LVMDELSVSPDSKSFAYRVFSYLALRSEKFNYTYCDRIVSVTDKLKDELVRLYSVPAEKV
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
IVINNGANTDIFKPMDQKQVRDRLKLDNSKKYVCFVGHLAAWQGVEFLIYAAPYILEKSP
EEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHCCCEEEEEECHHHCCCCC
DVRFLVVGDGVMKDKLIEIASKTGVLEKFTFTGRVPYESVPEYINAADVCVAPFIKDRNS
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCC
KIGLSALKTYEYLACGKPIVASDIAGVKDLLDLSGGGISVPPEIPGDLANAVVELISDQN
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCCCC
IRNAMGERGRKYVIENHSWDEVARKILDICYEII
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]