| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227231
Identifier: 21227231
GI number: 21227231
Start: 1332793
End: 1333887
Strand: Reverse
Name: 21227231
Synonym: MM_1129
Alternate gene names: NA
Gene position: 1333887-1332793 (Counterclockwise)
Preceding gene: 21227232
Following gene: 21227230
Centisome position: 32.56
GC content: 41.19
Gene sequence:
>1095_bases GTGAAAACCTTGAGGGTCATTGTTGATATCGGGCATCCGGCCCATGTTCACTTTTTCAAAAATGCTATATGGAACCTTGA AAAAAAGGGACATCAAGTTCTGGTTGTCTCAAGAGATAAGGATGTTGTAATTGAATTATTAAATGCTTATAATATCCCGC ATACAGTTCTGAGCAAGGTCAAGAAGGGTAAAATCTACCTCCTTGAAGAATTGTTCATAAGAGAATCCAAACTTTATAAA ATCGCTCGCAAATTTAATCCAGATCTCTTTATTGGTATTCTTTCTCCCGAAGCTGCTCATGTGGCCTGGGCACTGGGAAA GAAATCTATAATCTTTAATGACACTGAACATGCAGAATTAGCTCAAAAAATGACTTATCCTTTCTGTGATATCATCTGCA CGCCTGCGTCCTTTAAAAAAGACGTGGGACCAAAACAAATCAGATACAGAGGCTATCATGAAATGGCGTATCTTCACCCT GCTTATTTTTCTCCAAATCCTGAGGTTTTGAAAGAACTCGGTGTGGAGGCAGGTGAAACATTCGTGATTTTACGCTTTAT CTCATGGGGCGCACATCATGATGTAGGGCAGCATGGAATCAATAATAAACTAGCACTTATCCAGGAACTGGAAAAATTCG GGAAGGTCTTCATTTCCTCGGAAGGGCAAATGGCAGAAGAGTTTGACAAATATAAAATTAAGGTCCCCTCTGAAAAAATT CACAGTCTTCTTTATTATTCTACCCTGTGTGTAGGTGAAGGTGCAACTATGGCTGTTGAAAGTGCAATCCTTGGTACACC GTCTATTTATGTTTCATCTCTTGCAGGAAGCATGGGAAACTTCTCGGAACTTGAAGAGAACTACGGTCTTCTGTTCAATT ATAGCAATTCGGAAGCAGCCCTGAAAAAGGCTGTGGAGCTCCTTAAGGACCCCGAACTTAAGAAAACCTGGGGTCTTAAG AGAGACGCCCTTCTAAGGGACAAAGTTGATGTAACCGAATTCATGGTAAAACTCATAGAAGGGATTCCTGGGGAAAAGCG AGGGGAAAAGCAGGGATTTTCCGTATCTAAGGTCTCGGATGAGAGCCATGTATGA
Upstream 100 bases:
>100_bases GGCATTAAATCCTTCTTACCTTCCTTCCACCGCTGCCTTCCTCCAGGAAATGCTGCTCTTTTCCCTGCGTCAATATTTAT AAGCGGGAATCAGTTAGGGA
Downstream 100 bases:
>100_bases TTTATTAAAGCAAAAAGCAGATGTCTGGGACCTTTTTACCCGGAAAAAAGAATATCAGCCCAGCAAGCTTGATGAACATG GGCGTTTCTTTTTCACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKTLRVIVDIGHPAHVHFFKNAIWNLEKKGHQVLVVSRDKDVVIELLNAYNIPHTVLSKVKKGKIYLLEELFIRESKLYK IARKFNPDLFIGILSPEAAHVAWALGKKSIIFNDTEHAELAQKMTYPFCDIICTPASFKKDVGPKQIRYRGYHEMAYLHP AYFSPNPEVLKELGVEAGETFVILRFISWGAHHDVGQHGINNKLALIQELEKFGKVFISSEGQMAEEFDKYKIKVPSEKI HSLLYYSTLCVGEGATMAVESAILGTPSIYVSSLAGSMGNFSELEENYGLLFNYSNSEAALKKAVELLKDPELKKTWGLK RDALLRDKVDVTEFMVKLIEGIPGEKRGEKQGFSVSKVSDESHV
Sequences:
>Translated_364_residues MKTLRVIVDIGHPAHVHFFKNAIWNLEKKGHQVLVVSRDKDVVIELLNAYNIPHTVLSKVKKGKIYLLEELFIRESKLYK IARKFNPDLFIGILSPEAAHVAWALGKKSIIFNDTEHAELAQKMTYPFCDIICTPASFKKDVGPKQIRYRGYHEMAYLHP AYFSPNPEVLKELGVEAGETFVILRFISWGAHHDVGQHGINNKLALIQELEKFGKVFISSEGQMAEEFDKYKIKVPSEKI HSLLYYSTLCVGEGATMAVESAILGTPSIYVSSLAGSMGNFSELEENYGLLFNYSNSEAALKKAVELLKDPELKKTWGLK RDALLRDKVDVTEFMVKLIEGIPGEKRGEKQGFSVSKVSDESHV >Mature_364_residues MKTLRVIVDIGHPAHVHFFKNAIWNLEKKGHQVLVVSRDKDVVIELLNAYNIPHTVLSKVKKGKIYLLEELFIRESKLYK IARKFNPDLFIGILSPEAAHVAWALGKKSIIFNDTEHAELAQKMTYPFCDIICTPASFKKDVGPKQIRYRGYHEMAYLHP AYFSPNPEVLKELGVEAGETFVILRFISWGAHHDVGQHGINNKLALIQELEKFGKVFISSEGQMAEEFDKYKIKVPSEKI HSLLYYSTLCVGEGATMAVESAILGTPSIYVSSLAGSMGNFSELEENYGLLFNYSNSEAALKKAVELLKDPELKKTWGLK RDALLRDKVDVTEFMVKLIEGIPGEKRGEKQGFSVSKVSDESHV
Specific function: Unknown
COG id: COG1817
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007152 [H]
Pfam domain/function: PF04007 DUF354 [H]
EC number: NA
Molecular weight: Translated: 41029; Mature: 41029
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLRVIVDIGHPAHVHFFKNAIWNLEKKGHQVLVVSRDKDVVIELLNAYNIPHTVLSKV CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHH KKGKIYLLEELFIRESKLYKIARKFNPDLFIGILSPEAAHVAWALGKKSIIFNDTEHAEL CCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEECCCHHHHH AQKMTYPFCDIICTPASFKKDVGPKQIRYRGYHEMAYLHPAYFSPNPEVLKELGVEAGET HHHHCCCHHHEEECCHHHHHCCCHHHHHHCCCHHHHEECCCCCCCCHHHHHHCCCCCCCC FVILRFISWGAHHDVGQHGINNKLALIQELEKFGKVFISSEGQMAEEFDKYKIKVPSEKI EEEEEEHHCCCCCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCEEEECCHHHH HSLLYYSTLCVGEGATMAVESAILGTPSIYVSSLAGSMGNFSELEENYGLLFNYSNSEAA HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCEEEEECCHHHH LKKAVELLKDPELKKTWGLKRDALLRDKVDVTEFMVKLIEGIPGEKRGEKQGFSVSKVSD HHHHHHHHCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCC ESHV CCCC >Mature Secondary Structure MKTLRVIVDIGHPAHVHFFKNAIWNLEKKGHQVLVVSRDKDVVIELLNAYNIPHTVLSKV CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHH KKGKIYLLEELFIRESKLYKIARKFNPDLFIGILSPEAAHVAWALGKKSIIFNDTEHAEL CCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEECCCHHHHH AQKMTYPFCDIICTPASFKKDVGPKQIRYRGYHEMAYLHPAYFSPNPEVLKELGVEAGET HHHHCCCHHHEEECCHHHHHCCCHHHHHHCCCHHHHEECCCCCCCCHHHHHHCCCCCCCC FVILRFISWGAHHDVGQHGINNKLALIQELEKFGKVFISSEGQMAEEFDKYKIKVPSEKI EEEEEEHHCCCCCCHHHCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHCCEEEECCHHHH HSLLYYSTLCVGEGATMAVESAILGTPSIYVSSLAGSMGNFSELEENYGLLFNYSNSEAA HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCEEEEECCHHHH LKKAVELLKDPELKKTWGLKRDALLRDKVDVTEFMVKLIEGIPGEKRGEKQGFSVSKVSD HHHHHHHHCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCC ESHV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]