| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227229
Identifier: 21227229
GI number: 21227229
Start: 1330844
End: 1331770
Strand: Reverse
Name: 21227229
Synonym: MM_1127
Alternate gene names: NA
Gene position: 1331770-1330844 (Counterclockwise)
Preceding gene: 21227230
Following gene: 21227228
Centisome position: 32.51
GC content: 44.34
Gene sequence:
>927_bases ATGGAGCCTGATTCTAAAGGGAGATATCTTCTGATCACACCTGCAAGAAATGAAGAAAAAAACCTGCCTGAAGTTTCCAG GTCTGTTGCCGGGCAGAAAATCACGCCTGTACTCTGGATCATAGTGGACGACGGAAGTACGGACGGAACTCCTCATATTC TCGAAGACCTGAAAACAAAATATTCCTGGATTCGGAGTATAAGGCTTCCTCCAAGGCCCAGGGATATAACTTTTCACTAC AGCTACGTCTGCAAACAGGGATTTGATTATACGCTGGAATACTGCAGAGAAAACGGCATTGGGTATGACTATATAGGTCT TCTTGACGCCGATACCATACTGGAAGAAAACTATTTTGGAAAATTAATAGACGAATTTGAAAAGGACTCCTCTCTCGGGA TTGCAAGCGGTGGGGTTTATTATGATACGGGCGGCAAGCTTTCACGGGAAGTTTCAGATAAAAACCTGCCCCGTGGCACT GGCAGGCTCTGGAGAAAAGCCTGTTTCCTCGAAACTGGGGGCTATCAGGTAGAGCCTTCCCCTGACTCCATCTCCAATAC TAAAGCAATTCTCAGGGGCTGGCAGCTGAAGCAGTATGCAGATGTCGTTGAGGTCCAGACAAGGAAAACGAGTGCAGGAG AAGGTCTCTGGAATGGATATGTTAAAAATGGCTGGATGGCTCATTACGTAGATAAAAGCCTTCCCATGGTTCTATTCAAT ACGCTTTATTATTGCCTGAAATCTCCTTATTACACTGGTACTGCGTATTTTTACGGTTACCTGAATTCGGTTATTAAAAA AGATGTGAAAATCCAGGATATGGAGATAAGAAATTATTACAGAAGCCAGGGCCTGGGATTTTTGTTTTCCAGAGTTTCGG GAGTTTTAAACAACAATTCTACAGAGCCCGAGCAGGGAGAGCAATGA
Upstream 100 bases:
>100_bases AGAAAAGACTGGATAAAGCTTTACGAAAAAGCACTGCAATACTGTTCCGAAAAAGGAGCATGGATCACAAGCGGAGAAGA GATCTACAGGTGGTGGGAAA
Downstream 100 bases:
>100_bases TCACTTTAAAATATTTTAATAGAGTATTTTGTTAAGGTGATTGTATGAAAATGCTCTTTCTGGACATCGTGTGGCCTCTT TACCTGGCTGACGGGTCGCT
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase Family 2 Domain Protein; Family Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MEPDSKGRYLLITPARNEEKNLPEVSRSVAGQKITPVLWIIVDDGSTDGTPHILEDLKTKYSWIRSIRLPPRPRDITFHY SYVCKQGFDYTLEYCRENGIGYDYIGLLDADTILEENYFGKLIDEFEKDSSLGIASGGVYYDTGGKLSREVSDKNLPRGT GRLWRKACFLETGGYQVEPSPDSISNTKAILRGWQLKQYADVVEVQTRKTSAGEGLWNGYVKNGWMAHYVDKSLPMVLFN TLYYCLKSPYYTGTAYFYGYLNSVIKKDVKIQDMEIRNYYRSQGLGFLFSRVSGVLNNNSTEPEQGEQ
Sequences:
>Translated_308_residues MEPDSKGRYLLITPARNEEKNLPEVSRSVAGQKITPVLWIIVDDGSTDGTPHILEDLKTKYSWIRSIRLPPRPRDITFHY SYVCKQGFDYTLEYCRENGIGYDYIGLLDADTILEENYFGKLIDEFEKDSSLGIASGGVYYDTGGKLSREVSDKNLPRGT GRLWRKACFLETGGYQVEPSPDSISNTKAILRGWQLKQYADVVEVQTRKTSAGEGLWNGYVKNGWMAHYVDKSLPMVLFN TLYYCLKSPYYTGTAYFYGYLNSVIKKDVKIQDMEIRNYYRSQGLGFLFSRVSGVLNNNSTEPEQGEQ >Mature_308_residues MEPDSKGRYLLITPARNEEKNLPEVSRSVAGQKITPVLWIIVDDGSTDGTPHILEDLKTKYSWIRSIRLPPRPRDITFHY SYVCKQGFDYTLEYCRENGIGYDYIGLLDADTILEENYFGKLIDEFEKDSSLGIASGGVYYDTGGKLSREVSDKNLPRGT GRLWRKACFLETGGYQVEPSPDSISNTKAILRGWQLKQYADVVEVQTRKTSAGEGLWNGYVKNGWMAHYVDKSLPMVLFN TLYYCLKSPYYTGTAYFYGYLNSVIKKDVKIQDMEIRNYYRSQGLGFLFSRVSGVLNNNSTEPEQGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35129; Mature: 35129
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPDSKGRYLLITPARNEEKNLPEVSRSVAGQKITPVLWIIVDDGSTDGTPHILEDLKTK CCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH YSWIRSIRLPPRPRDITFHYSYVCKQGFDYTLEYCRENGIGYDYIGLLDADTILEENYFG HHHHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHCCCCEEEEEHCCHHHHHHHHHHH KLIDEFEKDSSLGIASGGVYYDTGGKLSREVSDKNLPRGTGRLWRKACFLETGGYQVEPS HHHHHHHCCCCCEEECCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCEEECCC PDSISNTKAILRGWQLKQYADVVEVQTRKTSAGEGLWNGYVKNGWMAHYVDKSLPMVLFN CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEHHCCCCHHHHHH TLYYCLKSPYYTGTAYFYGYLNSVIKKDVKIQDMEIRNYYRSQGLGFLFSRVSGVLNNNS HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCC TEPEQGEQ CCCCCCCC >Mature Secondary Structure MEPDSKGRYLLITPARNEEKNLPEVSRSVAGQKITPVLWIIVDDGSTDGTPHILEDLKTK CCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHH YSWIRSIRLPPRPRDITFHYSYVCKQGFDYTLEYCRENGIGYDYIGLLDADTILEENYFG HHHHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHCCCCEEEEEHCCHHHHHHHHHHH KLIDEFEKDSSLGIASGGVYYDTGGKLSREVSDKNLPRGTGRLWRKACFLETGGYQVEPS HHHHHHHCCCCCEEECCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCEEECCC PDSISNTKAILRGWQLKQYADVVEVQTRKTSAGEGLWNGYVKNGWMAHYVDKSLPMVLFN CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEHHCCCCHHHHHH TLYYCLKSPYYTGTAYFYGYLNSVIKKDVKIQDMEIRNYYRSQGLGFLFSRVSGVLNNNS HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHCCCC TEPEQGEQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA