Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227212

Identifier: 21227212

GI number: 21227212

Start: 1303472

End: 1304134

Strand: Reverse

Name: 21227212

Synonym: MM_1110

Alternate gene names: NA

Gene position: 1304134-1303472 (Counterclockwise)

Preceding gene: 21227214

Following gene: 21227211

Centisome position: 31.84

GC content: 47.06

Gene sequence:

>663_bases
ATGACCATAATAGGAGTTATCACAAGGGGCAAGTACGGGCACCGCCTTATTGAAACCATAAAGGAACACAGTGACTTCTC
GGTTGTAACTGCCGATCTGCCTGAGTTCGTGCCTGCATTCATTGAGGAGCCTGACGAATTCCTGGAAAACCTCAATTTCG
ACAGGAATGTCTTTTCTGCCGAGATCGTGATTAGTTATTCCCTTCATCCTGACCTTACTCAGGCAATTGCAAAGCTTGCC
GCAGAAGCCGGGGTTCGATCTTTAATTGTTCCTGGAGGACCTTCCAGGGCATCAGTCCCTGAACTTAAAAAGATTTCAGA
AATTTCCGGAATGGATATAGAAGTAGACGAAATTTGCTGTACCCTCGAGCCCAACTTATACAATAAGCCCTTTGCTGAGA
TTTTCGGGTCTCCTGTTCTGGAAGTCAGGACTGAAAACGGGAAAATCGCTGAAGTTAAGGTTTTAAAAGGAGCTCCCTGC
GGGAGTACGTGGCATATGGCAAAGGAAATTGTCGGGGTGCCTGTAAAGGATGCTCCTCCGAAAGCCGGCCTCTTAATCCA
GCACTATCCCTGTAGGGCGGCAAGGGGTGACCTTGGAGGTATTCATGAATCAGGAGAATTGCATAAACAGGCGCTGATAA
AAGCCCTTGAAAATGAGAAGTGA

Upstream 100 bases:

>100_bases
TATCTGTATTTATAGCCTGCAGGAGCCAGTGGCAACTAACAGGACAGTGTTCCGGATAAAATGAGTATCTATTTATGTAA
ACATTAAAAATAGCTTAGTA

Downstream 100 bases:

>100_bases
TTATATATTCTTTGGAAATATAATCTAAATATGGCAAAAAAAATGGAGTTCATTTTTCAGTTATGAAATTCCTGTTTTTT
GCCTGTACTGGTTGCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTIIGVITRGKYGHRLIETIKEHSDFSVVTADLPEFVPAFIEEPDEFLENLNFDRNVFSAEIVISYSLHPDLTQAIAKLA
AEAGVRSLIVPGGPSRASVPELKKISEISGMDIEVDEICCTLEPNLYNKPFAEIFGSPVLEVRTENGKIAEVKVLKGAPC
GSTWHMAKEIVGVPVKDAPPKAGLLIQHYPCRAARGDLGGIHESGELHKQALIKALENEK

Sequences:

>Translated_220_residues
MTIIGVITRGKYGHRLIETIKEHSDFSVVTADLPEFVPAFIEEPDEFLENLNFDRNVFSAEIVISYSLHPDLTQAIAKLA
AEAGVRSLIVPGGPSRASVPELKKISEISGMDIEVDEICCTLEPNLYNKPFAEIFGSPVLEVRTENGKIAEVKVLKGAPC
GSTWHMAKEIVGVPVKDAPPKAGLLIQHYPCRAARGDLGGIHESGELHKQALIKALENEK
>Mature_219_residues
TIIGVITRGKYGHRLIETIKEHSDFSVVTADLPEFVPAFIEEPDEFLENLNFDRNVFSAEIVISYSLHPDLTQAIAKLAA
EAGVRSLIVPGGPSRASVPELKKISEISGMDIEVDEICCTLEPNLYNKPFAEIFGSPVLEVRTENGKIAEVKVLKGAPCG
STWHMAKEIVGVPVKDAPPKAGLLIQHYPCRAARGDLGGIHESGELHKQALIKALENEK

Specific function: Unknown

COG id: COG1810

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0838 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003745
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02593 DUF166 [H]

EC number: NA

Molecular weight: Translated: 23978; Mature: 23847

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIGVITRGKYGHRLIETIKEHSDFSVVTADLPEFVPAFIEEPDEFLENLNFDRNVFSA
CEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEE
EIVISYSLHPDLTQAIAKLAAEAGVRSLIVPGGPSRASVPELKKISEISGMDIEVDEICC
EEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHEEE
TLEPNLYNKPFAEIFGSPVLEVRTENGKIAEVKVLKGAPCGSTWHMAKEIVGVPVKDAPP
EECCCCCCCCHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
KAGLLIQHYPCRAARGDLGGIHESGELHKQALIKALENEK
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIIGVITRGKYGHRLIETIKEHSDFSVVTADLPEFVPAFIEEPDEFLENLNFDRNVFSA
EEEEEEECCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEE
EIVISYSLHPDLTQAIAKLAAEAGVRSLIVPGGPSRASVPELKKISEISGMDIEVDEICC
EEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHEEE
TLEPNLYNKPFAEIFGSPVLEVRTENGKIAEVKVLKGAPCGSTWHMAKEIVGVPVKDAPP
EECCCCCCCCHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
KAGLLIQHYPCRAARGDLGGIHESGELHKQALIKALENEK
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]