| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227199
Identifier: 21227199
GI number: 21227199
Start: 1291928
End: 1292317
Strand: Reverse
Name: 21227199
Synonym: MM_1097
Alternate gene names: NA
Gene position: 1292317-1291928 (Counterclockwise)
Preceding gene: 21227200
Following gene: 21227183
Centisome position: 31.55
GC content: 46.41
Gene sequence:
>390_bases ATGGAGTACATTACGTTAACAGGAATTGCCGACTCCGTGATCGAGATCCTGAAAAAGCACGATCTCAGGACTCTTGAGAT CCGAAATCCGCAGAACTTCTTTGGAGTACTAGGACTCAATGCAGGAGACAGTGTTCTCCTGACTTCCACAAGCCTTCAGG ATCTAACTGATGGGACCCAGGGGCTTATAGCAAGAGTTGTCCAGAAGCAGATCTCAGTCCACTCTTTTGTAAGCTCAAGT GAACTCTATATTGAAGAGCGAGAAGCTCTGTCAGCACGCATTCAGCTTGAATGCAGATGTATGGCAAGGGTAAGGAACGT TATCTCAAACGAAATAGGAAAACCCGTTATAGTAGACGCAAGGGAGATCTCCTGCTACGAAGCCCGTTAA
Upstream 100 bases:
>100_bases GAGCGCATAGAAATCGAACTCCAGAGGCTTGCTGAAGACGTTCAGGCTACCGAGCGGAAAGGAGAAGTCAAAAAGGAGTT CCCAATGTACGGGTGATCTC
Downstream 100 bases:
>100_bases AGTTTATTTGATTGGTATACTTGCCAGAACCCAGTTCCGAATATGTTTTTTGGAGCCATTAACCCTCTTATAATATTCGG CTTTAAAATCCGGATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEYITLTGIADSVIEILKKHDLRTLEIRNPQNFFGVLGLNAGDSVLLTSTSLQDLTDGTQGLIARVVQKQISVHSFVSSS ELYIEEREALSARIQLECRCMARVRNVISNEIGKPVIVDAREISCYEAR
Sequences:
>Translated_129_residues MEYITLTGIADSVIEILKKHDLRTLEIRNPQNFFGVLGLNAGDSVLLTSTSLQDLTDGTQGLIARVVQKQISVHSFVSSS ELYIEEREALSARIQLECRCMARVRNVISNEIGKPVIVDAREISCYEAR >Mature_129_residues MEYITLTGIADSVIEILKKHDLRTLEIRNPQNFFGVLGLNAGDSVLLTSTSLQDLTDGTQGLIARVVQKQISVHSFVSSS ELYIEEREALSARIQLECRCMARVRNVISNEIGKPVIVDAREISCYEAR
Specific function: Unknown
COG id: COG1935
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14381; Mature: 14381
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYITLTGIADSVIEILKKHDLRTLEIRNPQNFFGVLGLNAGDSVLLTSTSLQDLTDGTQ CCEEEECCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCEEEEEECCHHHHCCCHH GLIARVVQKQISVHSFVSSSELYIEEREALSARIQLECRCMARVRNVISNEIGKPVIVDA HHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC REISCYEAR CCCEEECCC >Mature Secondary Structure MEYITLTGIADSVIEILKKHDLRTLEIRNPQNFFGVLGLNAGDSVLLTSTSLQDLTDGTQ CCEEEECCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCEEEEEECCHHHHCCCHH GLIARVVQKQISVHSFVSSSELYIEEREALSARIQLECRCMARVRNVISNEIGKPVIVDA HHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC REISCYEAR CCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA